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Comment:
Comment: How do I explain the difference between edgeR, LIMMA, DESeq etc. to experimental
11 months ago by
Kevin Blighe
88k
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1
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1.6k
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Comment:
Comment: Obtaining the AF and DP values for variants in a VCF
12 months ago by
Kevin Blighe
88k
2
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1
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3.8k
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Comment:
Comment: MAPQ filtering for clinical applications
12 months ago by
Kevin Blighe
88k
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1
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3.8k
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Comment:
Comment: MAPQ filtering for clinical applications
12 months ago by
Kevin Blighe
88k
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2.7k
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Comment:
Comment: Subsetting DESeq data set to compare treatments within one group (multi-group ex
12 months ago by
Kevin Blighe
88k
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499
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Comment:
Comment: I am looking for public databases of chest computed tomography reports
12 months ago by
Kevin Blighe
88k
0
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1
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614
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Comment:
Comment: colour background on lables from EnhancedVolcano in R
13 months ago by
Kevin Blighe
88k
1
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1.0k
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Comment:
Comment: ROC analysis, is this ROC curve usual?
13 months ago by
Kevin Blighe
88k
1
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1
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1.0k
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Comment:
Comment: ROC analysis, is this ROC curve usual?
13 months ago by
Kevin Blighe
88k
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1
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1.0k
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Comment:
Comment: ROC analysis, is this ROC curve usual?
13 months ago by
Kevin Blighe
88k
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18k
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Comment:
Comment: Is the heterozygosity flag (--het) in vcftools calculate observed and expected h
14 months ago by
Kevin Blighe
88k
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1
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6.3k
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Comment:
Comment: gene filtering for agilent microarray using Limma
14 months ago by
Kevin Blighe
88k
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1.4k
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Comment:
Comment: how to merge the DNA_methylation data downloaded for GDC database
14 months ago by
Kevin Blighe
88k
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1.7k
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Comment:
Comment: GDCquery error downloading TARGET-AML data
14 months ago by
Kevin Blighe
88k
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1
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923
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Comment:
Comment: Enrichment analysis based on kegg for zebrafish
14 months ago by
Kevin Blighe
88k
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1.8k
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Comment:
Comment: What are Differentially Expressed Genes ?!!
14 months ago by
Kevin Blighe
88k
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788
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Comment:
Comment: How can I avoid artifacts in gene set/pathway scoring by UCell and similar algor
15 months ago by
Kevin Blighe
88k
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1
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1.0k
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Comment:
Comment: Calculation of gene expression 2^-ΔΔCt.
15 months ago by
Kevin Blighe
88k
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0
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2.6k
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Comment:
Comment: Automated dbSNP lookup by rsID position, plus genome build liftover
15 months ago by
Kevin Blighe
88k
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0
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467
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Comment:
Comment: differential expression analysis
15 months ago by
Kevin Blighe
88k
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1
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20k
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Comment:
Comment: How to extract the list of genes from TCGA CNV data
15 months ago by
Kevin Blighe
88k
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9.1k
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Comment:
Comment: WGCNA pearson or bicor? Also, should I adjust module correlation Pvalues by Bonf
17 months ago by
Kevin Blighe
88k
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0
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823
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Comment:
Comment: Is there a way to obtain a list/dataframe of the CorLevelPlot results?
18 months ago by
Kevin Blighe
88k
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9.3k
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Comment:
Comment: Predicting survival of cancer patients using glmnet cox
18 months ago by
Kevin Blighe
88k
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0
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13k
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Comment:
Comment: ENSMUSG number convert to gene name
18 months ago by
Kevin Blighe
88k
1
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0
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928
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Comment:
Comment: Animation of EnhancedVolcano?
18 months ago by
Kevin Blighe
88k
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0
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736
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Comment:
Comment: Retrieve all reviewed proteins from a list of species names
18 months ago by
Kevin Blighe
88k
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0
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4.5k
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Comment:
Comment: Use padj instead of p-value to ploting DE genes using EnhancedVolcano
19 months ago by
Kevin Blighe
88k
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1.0k
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Comment:
Comment: RNA-Seq Reads Count
19 months ago by
Kevin Blighe
88k
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1
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2.2k
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Comment:
Comment: R lags error
19 months ago by
Kevin Blighe
88k
2
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1
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47k
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Comment:
Comment: Produce PCA bi-plot for 1000 Genomes Phase III - Version 2
19 months ago by
Kevin Blighe
88k
0
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1
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47k
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Comment:
Comment: Produce PCA bi-plot for 1000 Genomes Phase III - Version 2
19 months ago by
Kevin Blighe
88k
0
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0
replies
1.1k
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Comment:
Comment: Pattern match using R Biostrings
20 months ago by
Kevin Blighe
88k
0
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1
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1.1k
views
Comment:
Comment: Pattern match using R Biostrings
20 months ago by
Kevin Blighe
88k
0
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1
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722
views
Comment:
Comment: Basic PRS question
20 months ago by
Kevin Blighe
88k
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1
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2.0k
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Comment:
Comment: microarray analysis in R
20 months ago by
Kevin Blighe
88k
0
votes
2
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2.0k
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Comment:
Comment: microarray analysis in R
20 months ago by
Kevin Blighe
88k
0
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1
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2.0k
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Comment:
Comment: microarray analysis in R
20 months ago by
Kevin Blighe
88k
0
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1
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986
views
Comment:
Comment: converting probes robes to gene IDs
20 months ago by
Kevin Blighe
88k
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1
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2.0k
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Comment:
Comment: microarray analysis in R
20 months ago by
Kevin Blighe
88k
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1
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2.0k
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Comment:
Comment: microarray analysis in R
20 months ago by
Kevin Blighe
88k
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2.0k
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Comment:
Comment: microarray analysis in R
20 months ago by
Kevin Blighe
88k
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0
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1.1k
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Comment:
Comment: Command to insert column with text according to specific text in another column
20 months ago by
Kevin Blighe
88k
0
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0
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12k
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Comment:
Comment: Why is 0/0 homozygous reference call in VCF useful information?
20 months ago by
Kevin Blighe
88k
0
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1
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916
views
Comment:
Comment: Find top genes that correlate with my gene of interest using TCGA RNA-Seq data a
20 months ago by
Kevin Blighe
88k
1
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0
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31k
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Comment:
Comment: EnhancedVolcano: Publication-ready volcano plots with enhanced colouring and lab
20 months ago by
Kevin Blighe
88k
1
vote
0
replies
31k
views
Comment:
Comment: EnhancedVolcano: Publication-ready volcano plots with enhanced colouring and lab
20 months ago by
Kevin Blighe
88k
0
votes
1
reply
31k
views
Comment:
Comment: EnhancedVolcano: Publication-ready volcano plots with enhanced colouring and lab
20 months ago by
Kevin Blighe
88k
1
vote
2
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31k
views
Comment:
Comment: EnhancedVolcano: Publication-ready volcano plots with enhanced colouring and lab
20 months ago by
Kevin Blighe
88k
0
votes
0
replies
3.3k
views
Comment:
Comment: PCAtools data file not linking to metadata file
20 months ago by
Kevin Blighe
88k
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