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Comment: Comment: Is there a benchmark analysis for the best tool for multiome single-cell RNA+ATA
8 months ago by jared.andrews07 ★ 17k
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946
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Comment: Comment: Is there a benchmark analysis for the best tool for multiome single-cell RNA+ATA
8 months ago by jared.andrews07 ★ 17k
1
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0
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839
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Answer: Answer: trajectory-like graph for a data frame
8 months ago by jared.andrews07 ★ 17k
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1
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2.4k
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Comment: Comment: Seeking feedback on ChIP-seq normalization method: Calculating scaling factors b
8 months ago by jared.andrews07 ★ 17k
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1
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790
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Comment: Comment: Joint RNA and ATAC analysis: 10x multiomic - Fragment Path
8 months ago by jared.andrews07 ★ 17k
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1
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790
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Answer: Answer: Joint RNA and ATAC analysis: 10x multiomic - Fragment Path
8 months ago by jared.andrews07 ★ 17k
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1.1k
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Comment: Comment: Cluster annotation in single cell
8 months ago by jared.andrews07 ★ 17k
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1
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1.3k
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Comment: Comment: How to remove the gene label in heatmap RNA-seq
8 months ago by jared.andrews07 ★ 17k
3
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1
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1.3k
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Answer: Answer: How to remove the gene label in heatmap RNA-seq
8 months ago by jared.andrews07 ★ 17k
1
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1
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549
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Answer: Answer: how to filter the scRNAseq data, by percent genes expression, counts and others
8 months ago by jared.andrews07 ★ 17k
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1.1k
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Comment: Comment: Batch correction in DESeq2 - limited impact for unsupervised downstream analyses
8 months ago by jared.andrews07 ★ 17k
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1
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1.5k
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Comment: Comment: ChIP-seq visualization: Is it valid to do a coverage normalization in addition t
8 months ago by jared.andrews07 ★ 17k
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0
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1.2k
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Comment: Comment: R based query about making pairwise matrix
8 months ago by jared.andrews07 ★ 17k
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1.2k
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Answer: Answer: R based query about making pairwise matrix
8 months ago by jared.andrews07 ★ 17k
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2
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1.1k
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Answer: Answer: Batch correction in DESeq2 - limited impact for unsupervised downstream analyses
8 months ago by jared.andrews07 ★ 17k
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0
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2.7k
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Answer: Answer: InferCNV results interpretation
8 months ago by jared.andrews07 ★ 17k
2
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2
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1.5k
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Answer: Answer: ChIP-seq visualization: Is it valid to do a coverage normalization in addition t
updated 8 months ago by 44k • written 8 months ago by ★ 17k
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0
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1.2k
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Comment: Comment: open source projects looking for contributors
8 months ago by jared.andrews07 ★ 17k
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1
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1.2k
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Comment: Comment: open source projects looking for contributors
8 months ago by jared.andrews07 ★ 17k
1
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0
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413
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Answer: Answer: DESeq2 design formula for time - condition - donor
8 months ago by jared.andrews07 ★ 17k
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0
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1.4k
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Comment: Comment: Differential Expression using Isoseq-supplemented reference transcriptome
8 months ago by jared.andrews07 ★ 17k
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1
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1.4k
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Comment: Comment: Problems using ERCC spike-ins for normalization in DESeq2
8 months ago by jared.andrews07 ★ 17k
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0
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1.5k
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Answer: Answer: Is Bioinformatics a Professional Degree?
8 months ago by jared.andrews07 ★ 17k
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1
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1.2k
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Comment: Comment: open source projects looking for contributors
8 months ago by jared.andrews07 ★ 17k
1
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0
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985
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Comment: Comment: Biostar as a next generation version
8 months ago by jared.andrews07 ★ 17k
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1
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901
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Answer: Answer: A cluster expresses two types of cells' markers in scRNA-seq
9 months ago by jared.andrews07 ★ 17k
4
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2
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1.4k
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Answer: Answer: Problems using ERCC spike-ins for normalization in DESeq2
9 months ago by jared.andrews07 ★ 17k
2
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0
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775
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Comment: Comment: Load MF, CC and BP from org.Hs.eg.db
9 months ago by jared.andrews07 ★ 17k
1
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1
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775
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Answer: Answer: Load MF, CC and BP from org.Hs.eg.db
updated 9 months ago by 44k • written 9 months ago by ★ 17k
1
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0
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2.4k
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Comment: Comment: Seeking feedback on ChIP-seq normalization method: Calculating scaling factors b
9 months ago by jared.andrews07 ★ 17k
1
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0
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844
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Answer: Answer: How to loop over certain files within a directory that belongs to certain sample
9 months ago by jared.andrews07 ★ 17k
1
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2
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2.4k
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Comment: Comment: Seeking feedback on ChIP-seq normalization method: Calculating scaling factors b
9 months ago by jared.andrews07 ★ 17k
1
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0
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2.4k
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Comment: Comment: Seeking feedback on ChIP-seq normalization method: Calculating scaling factors b
9 months ago by jared.andrews07 ★ 17k
3
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3
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2.4k
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Answer: Answer: Seeking feedback on ChIP-seq normalization method: Calculating scaling factors b
9 months ago by jared.andrews07 ★ 17k
0
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1
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471
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Answer: Answer: About batch effect in separate library preparation for multiple samples tested o
9 months ago by jared.andrews07 ★ 17k
1
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0
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534
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Answer: Answer: Bioinformatics Workflow
9 months ago by jared.andrews07 ★ 17k
0
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0
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872
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Comment: Comment: Error with plot functions: Graphic API version mismatch
9 months ago by jared.andrews07 ★ 17k
1
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0
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914
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Answer: Answer: Choosing a cut-off for mitochondrial genes in brain scRNAseq
9 months ago by jared.andrews07 ★ 17k
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0
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1.0k
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Comment: Comment: CNA score calculation per cell
9 months ago by jared.andrews07 ★ 17k
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1
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1.0k
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Comment: Comment: CNA score calculation per cell
9 months ago by jared.andrews07 ★ 17k
1
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0
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723
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Answer: Answer: circular heatmap in R Shiny
updated 9 months ago by 44k • written 9 months ago by ★ 17k
1
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0
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682
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Answer: Answer: Cell Barcode Identification and Counting
updated 9 months ago by 44k • written 9 months ago by ★ 17k
0
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1
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1.0k
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Answer: Answer: CNA score calculation per cell
9 months ago by jared.andrews07 ★ 17k
1
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1
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987
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Comment: Comment: How to get a list of gene names from macs2 peaks
9 months ago by jared.andrews07 ★ 17k
1
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1
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987
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Answer: Answer: How to get a list of gene names from macs2 peaks
9 months ago by jared.andrews07 ★ 17k
0
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0
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632
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Comment: Comment: DiffBind error: No contrasts added. There must be at least two sample groups wit
9 months ago by jared.andrews07 ★ 17k
0
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1
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707
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Answer: Answer: identify cell of origin from bulk RNAseq data
9 months ago by jared.andrews07 ★ 17k
0
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1
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632
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Answer: Answer: DiffBind error: No contrasts added. There must be at least two sample groups wit
9 months ago by jared.andrews07 ★ 17k
0
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1
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1.2k
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Answer: Answer: gseGO() --> No gene can be mapped
9 months ago by jared.andrews07 ★ 17k
3
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1
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1.5k
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Answer: Answer: How to write a review article in bioinformatics
9 months ago by jared.andrews07 ★ 17k
1,468 results • Page 3 of 30
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