Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
1
vote
0
replies
603
views
Comment: Comment: Bulk RNA-seq: Different Expression Analysis with DEseq2
3 months ago by jared.andrews07 ★ 16k
2
votes
1
reply
690
views
Answer: Answer: No tumour cells in clustering of tumor sample?!
3 months ago by jared.andrews07 ★ 16k
2
votes
2
replies
636
views
Answer: Answer: Seurat Analysis: Deleting cells from seurat object
3 months ago by jared.andrews07 ★ 16k
1
vote
1
reply
10k
views
Comment: Comment: For CreateSeuratObject, Where Do the Values for min.cells and min.features come
3 months ago by jared.andrews07 ★ 16k
1
vote
1
reply
735
views
Comment: Comment: DESeq2 heatmap with low baseMean values
3 months ago by jared.andrews07 ★ 16k
0
votes
0
replies
949
views
Comment: Comment: Batch and Sample correction for downstream analysis using DESeq2
4 months ago by jared.andrews07 ★ 16k
1
vote
1
reply
949
views
Comment: Comment: Batch and Sample correction for downstream analysis using DESeq2
4 months ago by jared.andrews07 ★ 16k
1
vote
1
reply
949
views
Comment: Comment: Batch and Sample correction for downstream analysis using DESeq2
4 months ago by jared.andrews07 ★ 16k
2
votes
1
reply
1.0k
views
Answer: Answer: RNA Contamination Tool for Developing Cell Samples
4 months ago by jared.andrews07 ★ 16k
1
vote
1
reply
949
views
Answer: Answer: Batch and Sample correction for downstream analysis using DESeq2
4 months ago by jared.andrews07 ★ 16k
0
votes
0
replies
492
views
Comment: Comment: Single cell visulaisation webtool
4 months ago by jared.andrews07 ★ 16k
1
vote
0
replies
527
views
Comment: Comment: R ComplexHeatmap - Adujusting the cell size in heatmap
4 months ago by jared.andrews07 ★ 16k
0
votes
0
replies
573
views
Answer: Answer: Website or tool to obtain a list of genes that participate in a specific process
4 months ago by jared.andrews07 ★ 16k
4
votes
1
reply
597
views
Answer: Answer: Ambient RNA removal method that generates whole (integer) counts
5 months ago by jared.andrews07 ★ 16k
1
vote
0
replies
516
views
Answer: Answer: RNA-seq log2 fold change to linear
5 months ago by jared.andrews07 ★ 16k
0
votes
0
replies
1.5k
views
Comment: Comment: mouse+human cells in 10x scRNA-seq
5 months ago by jared.andrews07 ★ 16k
1
vote
0
replies
391
views
Answer: Answer: What type of cancer did they study in this paper?
5 months ago by jared.andrews07 ★ 16k
0
votes
0
replies
704
views
Comment: Comment: Calculation of ChIP-seq normalization factors with non-conventional spike-in ass
5 months ago by jared.andrews07 ★ 16k
0
votes
0
replies
704
views
Comment: Comment: Calculation of ChIP-seq normalization factors with non-conventional spike-in ass
5 months ago by jared.andrews07 ★ 16k
0
votes
4
replies
704
views
Calculation of ChIP-seq normalization factors with non-conventional spike-in assumptions
DiffBind csaw normalization spikein ChIPseq
5 months ago by jared.andrews07 ★ 16k
1
vote
1
reply
821
views
Answer: Answer: Doheatmap in seurat
6 months ago by jared.andrews07 ★ 16k
2
votes
1
reply
446
views
Answer: Answer: DepMap Portal
6 months ago by jared.andrews07 ★ 16k
1
vote
1
reply
965
views
Answer: Answer: How to remove the default title to a DimPlot() splitted into two by group.by ?
6 months ago by jared.andrews07 ★ 16k
0
votes
0
replies
630
views
Comment: Comment: macs2 output r file not generated
6 months ago by jared.andrews07 ★ 16k
2
votes
1
reply
630
views
Answer: Answer: macs2 output r file not generated
6 months ago by jared.andrews07 ★ 16k
0
votes
0
replies
526
views
Answer: Answer: Visium data analysis software supporting deconvolution analysis
6 months ago by jared.andrews07 ★ 16k
0
votes
0
replies
372
views
Comment: Comment: I'm doing RNA seq but the quality control sequence GC contens shape looks weird.
6 months ago by jared.andrews07 ★ 16k
3
votes
1
reply
1.4k
views
Answer: Answer: Mentor for a beginner bioinformatics student
6 months ago by jared.andrews07 ★ 16k
0
votes
0
replies
621
views
Comment: Comment: 2 dimensional quadrant plot
6 months ago by jared.andrews07 ★ 16k
0
votes
1
reply
1.8k
views
Comment: Comment: ROSE Algorithm: index out of range
6 months ago by jared.andrews07 ★ 16k
1
vote
0
replies
5.9k
views
Comment: Comment: Macbook M1 pro/M2 pro or Dell (with Ubuntu/other linux distribution) for bioinfo
7 months ago by jared.andrews07 ★ 16k
1
vote
1
reply
5.9k
views
Comment: Comment: Macbook M1 pro/M2 pro or Dell (with Ubuntu/other linux distribution) for bioinfo
7 months ago by jared.andrews07 ★ 16k
0
votes
0
replies
5.9k
views
Comment: Comment: Macbook M1 pro/M2 pro or Dell (with Ubuntu/other linux distribution) for bioinfo
6 months ago by jared.andrews07 ★ 16k
1
vote
0
replies
657
views
Comment: Comment: Chip-Seq and correlation of bam file
7 months ago by jared.andrews07 ★ 16k
2
votes
1
reply
657
views
Answer: Answer: Chip-Seq and correlation of bam file
7 months ago by jared.andrews07 ★ 16k
1
vote
0
replies
381
views
Answer: Answer: Transcription factor co-localization p-values
7 months ago by jared.andrews07 ★ 16k
0
votes
0
replies
933
views
Comment: Comment: Filter human transcription factors
7 months ago by jared.andrews07 ★ 16k
6
votes
3
replies
933
views
Answer: Answer: Filter transcription factors
7 months ago by jared.andrews07 ★ 16k
0
votes
0
replies
1.4k
views
Comment: Comment: scRNAseq Differential expression analysis
7 months ago by jared.andrews07 ★ 16k
0
votes
1
reply
601
views
Answer: Answer: GSEA Result Visualization in R
7 months ago by jared.andrews07 ★ 16k
9
votes
1
reply
3.5k
views
Comment: Comment: A list of technical advantages of Snakemake over Nextflow | Cloud solution for S
7 months ago by jared.andrews07 ★ 16k
1
vote
1
reply
908
views
Comment: Comment: Is there a benchmark analysis for the best tool for multiome single-cell RNA+ATA
7 months ago by jared.andrews07 ★ 16k
0
votes
1
reply
908
views
Comment: Comment: Is there a benchmark analysis for the best tool for multiome single-cell RNA+ATA
7 months ago by jared.andrews07 ★ 16k
1
vote
0
replies
815
views
Answer: Answer: trajectory-like graph for a data frame
7 months ago by jared.andrews07 ★ 16k
1
vote
1
reply
2.3k
views
Comment: Comment: Seeking feedback on ChIP-seq normalization method: Calculating scaling factors b
7 months ago by jared.andrews07 ★ 16k
1
vote
1
reply
754
views
Comment: Comment: Joint RNA and ATAC analysis: 10x multiomic - Fragment Path
8 months ago by jared.andrews07 ★ 16k
0
votes
1
reply
754
views
Answer: Answer: Joint RNA and ATAC analysis: 10x multiomic - Fragment Path
8 months ago by jared.andrews07 ★ 16k
1
vote
0
replies
1.1k
views
Comment: Comment: Cluster annotation in single cell
8 months ago by jared.andrews07 ★ 16k
1
vote
1
reply
1.2k
views
Comment: Comment: How to remove the gene label in heatmap RNA-seq
8 months ago by jared.andrews07 ★ 16k
3
votes
1
reply
1.2k
views
Answer: Answer: How to remove the gene label in heatmap RNA-seq
8 months ago by jared.andrews07 ★ 16k
1,459 results • Page 2 of 30
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6