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jtwalker
jtwalker
Reputation:
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Joined:
9.2 years ago
Last seen:
9.0 years ago
Latest posts by user
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1 reply
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Comment: C: Speed up GATK joint genotype calling?
written by jtwalker • jtwalker
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4 replies
4.4K views
Speed up GATK joint genotype calling?
gatk gatk joint genotyping
written by jtwalker • jtwalker
0 votes
0 replies
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Answer: A: Badly formed genome location? GATK GenotypeGVCFs
written by jtwalker • jtwalker
0 votes
1 reply
6.5K views
VCF format: what does AD 1,0 denote?
vcf
updated by Pierre Lindenbaum Pierre Lindenbaum • written by jtwalker • jtwalker
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0 replies
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Comment: C: Badly formed genome location? GATK GenotypeGVCFs
written by jtwalker • jtwalker
0 votes
1 reply
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Comment: C: Badly formed genome location? GATK GenotypeGVCFs
written by jtwalker • jtwalker
0 votes
1 reply
0 views
Comment: C: Badly formed genome location? GATK GenotypeGVCFs
written by jtwalker • jtwalker
0 votes
7 replies
5.5K views
Badly formed genome location? GATK GenotypeGVCFs
gatk joint genotyping
written by jtwalker • jtwalker
0 votes
1 reply
274 views
GATK error message: Badly formed genome location
gatk genotype calling
written by jtwalker • jtwalker
0 votes
1 reply
0 views
Comment: C: Regarding vcf output
written by jtwalker • jtwalker
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0 replies
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Comment: C: GATK variantFiltration unexpected behaviour?
written by jtwalker • jtwalker
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0 replies
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Comment: C: GATK variantFiltration unexpected behaviour?
written by jtwalker • jtwalker
0 votes
0 replies
0 views
Comment: C: Filtering on MAF using the GATK?
written by jtwalker • jtwalker
0 votes
5 replies
3.3K views
GATK variantFiltration unexpected behaviour?
snp gatk variant filtration
written by jtwalker • jtwalker
0 votes
1 reply
0 views
Comment: C: Filtering on MAF using the GATK?
written by jtwalker • jtwalker
1 vote
1 reply
0 views
Answer: A: Any advanced and really structured course on Python language or My Sql or R or U
written by jtwalker • jtwalker
0 votes
4 replies
3.4K views
Filtering on MAF using the GATK?
gatk gatk variant filtering snp filtering
updated by Biostar Biostar • written by jtwalker • jtwalker
1 vote
3 replies
4.1K views
Should PCR duplicates always be removed?
gbs samtools pcr duplicates
updated by Biostar Biostar • written by jtwalker • jtwalker
0 votes
2 replies
3.5K views
How to filter a multisample VCF based on individual sample depth?
samtools mpileup vcf gbs
updated by pascal • pascal • written by jtwalker • jtwalker
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