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snishtala03
snishtala03
Reputation:
70
Joined:
9.4 years ago
Last seen:
5.8 years ago
Latest posts by user
0 votes
0 replies
1.1K views
Remove certain species from standard database of Kraken
rna-seq 16s kraken bracken metagenomics
updated by Biostar Biostar • written by snishtala03 • snishtala03
1 vote
0 replies
1.6K views
splicing with UMI barcodes - paired end illumina sequencing
star umi umitools illumina splicing
written by snishtala03 • snishtala03
0 votes
0 replies
0 views
Comment: C: STAR extract reads supporting junction from bam file
written by snishtala03 • snishtala03
0 votes
2 replies
1.7K views
STAR extract reads supporting junction from bam file
rna-seq star splicing
written by snishtala03 • snishtala03
0 votes
0 replies
0 views
Comment: C: Significance of column 'strand' and 'max splice overhang' in STAR output
written by snishtala03 • snishtala03
0 votes
2 replies
1.9K views
Significance of column 'strand' and 'max splice overhang' in STAR output
rna-seq star splicing
updated by Ram Ram • written by snishtala03 • snishtala03
0 votes
1 reply
0 views
Comment: C: single contig de novo assembly
written by snishtala03 • snishtala03
0 votes
4 replies
1.6K views
single contig de novo assembly
rna-seq de-novo assembly contig
written by snishtala03 • snishtala03
0 votes
0 replies
0 views
Comment: C: Splicing in virus using long read sequencing
written by snishtala03 • snishtala03
0 votes
0 replies
0 views
Comment: C: Splicing in virus using long read sequencing
written by snishtala03 • snishtala03
0 votes
1 reply
0 views
Comment: C: Splicing in virus using long read sequencing
written by snishtala03 • snishtala03
0 votes
5 replies
1.9K views
Splicing in virus using long read sequencing
pacbio minimap2 splicing long read sequencing
written by snishtala03 • snishtala03
0 votes
0 replies
1.9K views
primers for PacBio lima software
pacbio lima primer isoseq clontech
written by snishtala03 • snishtala03
0 votes
0 replies
0 views
Comment: C: count reads mapped to multiple locations only once
written by snishtala03 • snishtala03
1 vote
3 replies
2.4K views
count reads mapped to multiple locations only once
bwa alignment samtools multiple mapping
written by snishtala03 • snishtala03
4 votes
0 replies
0 views
Answer: A: samtools stats result different from samtools flagstat
written by snishtala03 • snishtala03
1 vote
2 replies
20K views
samtools stats result different from samtools flagstat
samtools
updated by adi.rotem • adi.rotem • written by snishtala03 • snishtala03
0 votes
1 reply
0 views
Comment: C: bbmerge merged read smaller that original reads
written by snishtala03 • snishtala03
0 votes
3 replies
4.8K views
bbmerge merged read smaller that original reads
bbmerge fastq alignment flash vsearch
updated by Ram Ram • written by snishtala03 • snishtala03
0 votes
1 reply
0 views
Comment: C: Introducing Clumpify: Create 30% Smaller, Faster Gzipped Fastq Files. And remov
written by snishtala03 • snishtala03
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