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aswartz85
aswartz85
Reputation:
20
Joined:
9.9 years ago
Last seen:
9.9 years ago
Latest posts by user
0 votes
2 replies
21K views
What is a bam.bai for?
rna-seq alignment
updated by chen chen • written by aswartz85 • aswartz85
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0 replies
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Comment: C: Will you critique/rate my mRNA seq alignment analysis?
written by aswartz85 • aswartz85
1 vote
2 replies
2.3K views
I have mRNA seq data from another lab that reports reads by RNA counts. How can I compare to my cufflinks data, which reports FPKM?
alignment rna-seq
written by aswartz85 • aswartz85
1 vote
5 replies
2.7K views
Will you critique/rate my mRNA seq alignment analysis?
rna-seq alignment
updated by Biostar Biostar • written by aswartz85 • aswartz85
0 votes
0 replies
0 views
Comment: C: Created SAM file using Hisat2 alignment. Now trying to convert to sorted.bam, b
written by aswartz85 • aswartz85
0 votes
1 reply
0 views
Comment: C: Created SAM file using Hisat2 alignment. Now trying to convert to sorted.bam, b
written by aswartz85 • aswartz85
0 votes
4 replies
4.1K views
Created SAM file using Hisat2 alignment. Now trying to convert to sorted.bam, but samtools just spitting out numerous gzip files
rna-seq alignment
written by aswartz85 • aswartz85
0 votes
3 replies
3.4K views
Am I using Tophat2 correctly? Segment-based junction search error keeps coming up.
rna-seq alignment
updated by Biostar Biostar • written by aswartz85 • aswartz85
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