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Showing :
answers
2
votes
1
reply
3.6k
views
Answer:
A: CNVkit - how many normal samples do I need for the pooled normal reference?
6.3 years ago by
Eric T.
★ 2.8k
0
votes
0
replies
1.3k
views
Answer:
A: CNVKit - Gene labels in 'diagram'
6.3 years ago by
Eric T.
★ 2.8k
1
vote
1
reply
5.3k
views
Answer:
A: visualize CNV data based on WGS
6.3 years ago by
Eric T.
★ 2.8k
1
vote
1
reply
3.1k
views
Answer:
A: tumor/normal WGS with CNVkit has many small segments with small copy number chan
6.3 years ago by
Eric T.
★ 2.8k
2
votes
1
reply
4.0k
views
Answer:
A: CNVKIT import errors
6.3 years ago by
Eric T.
★ 2.8k
1
vote
0
replies
1.3k
views
Answer:
A: Any techniques faster than Breakdancer?
6.4 years ago by
Eric T.
★ 2.8k
1
vote
1
reply
3.2k
views
Answer:
A: How to merge CNV of multiple samples from CNVkit
6.4 years ago by
Eric T.
★ 2.8k
2
votes
1
reply
3.1k
views
Answer:
A: WES germline CNV caller for trio analysis
6.5 years ago by
Eric T.
★ 2.8k
0
votes
0
replies
1.7k
views
Answer:
A: cnvkit segmetrics on multiple files
6.5 years ago by
Eric T.
★ 2.8k
0
votes
0
replies
1.6k
views
Answer:
A: Is cnvkit coverage output split into non-overlapping segments?
6.6 years ago by
Eric T.
★ 2.8k
0
votes
0
replies
2.6k
views
Answer:
A: Precision of loss of heterozygosity detection with Sanger sequencing vs copy num
6.6 years ago by
Eric T.
★ 2.8k
1
vote
1
reply
1.8k
views
Answer:
A: CNV calling on tumor sample with no germline counterpart
6.6 years ago by
Eric T.
★ 2.8k
3
votes
2
replies
2.5k
views
Answer:
A: Best CNV caller for Illumina WGRS data, in order to compare two phenotypes
6.6 years ago by
Eric T.
★ 2.8k
1
vote
0
replies
4.3k
views
Answer:
A: I need allele copy number information for running PyClone
6.6 years ago by
Eric T.
★ 2.8k
0
votes
0
replies
2.5k
views
Answer:
A: cvnkit: what is the problem here?
6.6 years ago by
Eric T.
★ 2.8k
2
votes
2
replies
6.4k
views
Answer:
A: How to import the output of CNVkit into GISTIC2.0 ?
6.7 years ago by
Eric T.
★ 2.8k
1
vote
0
replies
3.7k
views
Answer:
A: Structural Variant annotation
6.7 years ago by
Eric T.
★ 2.8k
1
vote
1
reply
1.8k
views
Answer:
A: Error due to annotation file while running target module from CNVkit tool
6.7 years ago by
Eric T.
★ 2.8k
0
votes
1
reply
2.9k
views
Answer:
A: amplicon based germline CNV caller
6.7 years ago by
Eric T.
★ 2.8k
1
vote
1
reply
2.3k
views
Answer:
A: Using CNVkit for hybrid capture data -- the huge CNV regions in results does not
6.7 years ago by
Eric T.
★ 2.8k
1
vote
0
replies
2.7k
views
Answer:
A: How to get the range of LOH?
6.7 years ago by
Eric T.
★ 2.8k
1
vote
0
replies
2.3k
views
Answer:
A: Understanding Weight column in .cns files in cnvkit
6.8 years ago by
Eric T.
★ 2.8k
1
vote
1
reply
3.4k
views
Answer:
A: calling the CNV in tumor-only samples (WGS and WES)
6.8 years ago by
Eric T.
★ 2.8k
3
votes
0
replies
2.0k
views
Answer:
A: Problems using cnvkit for ctDNA targeted sequencing
6.8 years ago by
Eric T.
★ 2.8k
0
votes
0
replies
2.4k
views
Answer:
A: CNVkit GRCh38 tumor-normal pair
6.9 years ago by
Eric T.
★ 2.8k
0
votes
0
replies
1.4k
views
Answer:
A: Recurrent Segmentation Errors
6.9 years ago by
Eric T.
★ 2.8k
1
vote
0
replies
3.2k
views
Answer:
A: "Shifted" copy number ratios coming from cnvkit?
6.9 years ago by
Eric T.
★ 2.8k
1
vote
0
replies
1.6k
views
Answer:
A: Question about run cnvkit on DNAnexus
6.9 years ago by
Eric T.
★ 2.8k
2
votes
1
reply
3.0k
views
Answer:
A: CNV detection of single cell genome sequencing
6.9 years ago by
Eric T.
★ 2.8k
1
vote
1
reply
7.6k
views
Answer:
A: What is probe number and segmentation mean in copy number variation(CNV) data
6.9 years ago by
Eric T.
★ 2.8k
3
votes
0
replies
2.3k
views
Answer:
A: Using cnvkit for targeted amplicon sequencing
6.9 years ago by
Eric T.
★ 2.8k
1
vote
0
replies
2.9k
views
Answer:
A: Are there NGS-based CNV callers that utilise allele frequency?
7.0 years ago by
Eric T.
★ 2.8k
0
votes
0
replies
1.6k
views
Answer:
A: CNVKIT scatter --range-list
7.0 years ago by
Eric T.
★ 2.8k
0
votes
1
reply
2.6k
views
Answer:
A: cnvkit , antitarget , cn , call cnv
7.0 years ago by
Eric T.
★ 2.8k
0
votes
0
replies
1.6k
views
Answer:
A: PSCBS segmentation file header
7.0 years ago by
Eric T.
★ 2.8k
0
votes
2
replies
3.5k
views
Answer:
A: Using THETA2 from CNVkit: what king of vcf do you need?
7.0 years ago by
Eric T.
★ 2.8k
2
votes
0
replies
3.8k
views
Answer:
A: CNVkit reference.cnn .cnr .cns log ratio
7.0 years ago by
Eric T.
★ 2.8k
2
votes
0
replies
3.3k
views
Answer:
A: Log 2 in CNV
7.0 years ago by
Eric T.
★ 2.8k
2
votes
0
replies
2.1k
views
Answer:
A: how to determine the controls for cnv
7.0 years ago by
Eric T.
★ 2.8k
0
votes
1
reply
3.3k
views
Answer:
A: reroot at any possible node in ete or with any other python
7.1 years ago by
Eric T.
★ 2.8k
3
votes
0
replies
4.7k
views
Answer:
A: Copy Number Variation Tools
7.2 years ago by
Eric T.
★ 2.8k
1
vote
0
replies
2.2k
views
Answer:
A: Explications about call function of CNVkit
7.2 years ago by
Eric T.
★ 2.8k
0
votes
1
reply
17k
views
Answer:
A: Module to RMSD two proteins with Python?
7.2 years ago by
Eric T.
★ 2.8k
1
vote
1
reply
3.7k
views
Answer:
A: Error 1: NULL byte detected when trying to segment by PSCBS
7.2 years ago by
Eric T.
★ 2.8k
6
votes
0
replies
4.3k
views
Answer:
A: How is the "weight" calculated by CNVkit ?
7.2 years ago by
Eric T.
★ 2.8k
0
votes
0
replies
3.4k
views
Answer:
A: How to convert my files(cnv seg, refseq) to .bed format ?
7.2 years ago by
Eric T.
★ 2.8k
4
votes
2
replies
3.8k
views
Answer:
A: CNVkit Segments vs Bins
7.2 years ago by
Eric T.
★ 2.8k
3
votes
1
reply
5.5k
views
Answer:
A: estimating tumor purity and ploidy and CNV
7.2 years ago by
Eric T.
★ 2.8k
0
votes
0
replies
3.5k
views
Answer:
A: How to export CNVkit results into PyClone?
7.3 years ago by
Eric T.
★ 2.8k
0
votes
1
reply
1.9k
views
Answer:
A: No call for exomes analysis
7.3 years ago by
Eric T.
★ 2.8k
174 results • Page
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