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Answer: Answer: Transcriptome assembly -mixing stranded and non-stranded data
2.2 years ago by lieven.sterck 15k
0
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0
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926
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Answer: Answer: Is There any command for retrieval (extraction) of covered sequence using Linux
2.3 years ago by lieven.sterck 15k
0
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0
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611
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Answer: Answer: generating draft genome
2.3 years ago by lieven.sterck 15k
1
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1
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1.8k
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Answer: Answer: Technical and Biological reads difference
2.3 years ago by lieven.sterck 15k
1
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0
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1.1k
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Answer: Answer: Downloading a subset of sequences from the NCBI nucleotide database
2.3 years ago by lieven.sterck 15k
3
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1
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621
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Answer: Answer: Create GFF3 file based on genomic fasta and cds fasta
2.3 years ago by lieven.sterck 15k
2
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1
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806
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Answer: Answer: What are accession numbers starting with PIR e.g. PIR60289?
2.4 years ago by lieven.sterck 15k
2
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1
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1.9k
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Answer: Answer: delete a file
2.4 years ago by lieven.sterck 15k
0
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1
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909
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Answer: Answer: What should be the best parameter to perform blastp
2.4 years ago by lieven.sterck 15k
4
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0
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1.2k
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Answer: Answer: Can an enzyme have multiple EC numbers?
2.4 years ago by lieven.sterck 15k
4
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0
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943
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Answer: Answer: Basename the contents of a file
2.4 years ago by lieven.sterck 15k
2
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1
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1.1k
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Answer: Answer: How to find a list homologous genes from different species?
2.4 years ago by lieven.sterck 15k
2
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0
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1.6k
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Answer: Answer: Difference in Contig Lengths from Transcriptome and Whole Genome Assembly
2.4 years ago by lieven.sterck 15k
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2
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1.4k
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Answer: Answer: blast returns staxid N/A and staxids 0
2.4 years ago by lieven.sterck 15k
3
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0
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1.3k
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Answer: Answer: Is there a database of bioinformatics tools & databases?
2.4 years ago by lieven.sterck 15k
1
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1
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1.4k
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Answer: Answer: Representable, non-homologous, non-redundant protein database
2.4 years ago by lieven.sterck 15k
0
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0
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895
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Answer: Answer: Conserved regions in multiple fasta files (multiple species)?
2.4 years ago by lieven.sterck 15k
2
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1
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1.5k
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Answer: Answer: Run multiple times samtools and sed for a big number of bam files in folder
2.5 years ago by lieven.sterck 15k
1
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2
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1.5k
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Answer: Answer: Trimmomatic Error
2.5 years ago by lieven.sterck 15k
1
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1
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1.1k
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Answer: Answer: Having a deletion coordinates how to know in which gene this is?
2.5 years ago by lieven.sterck 15k
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0
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2.4k
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Answer: Answer: Remove Gaps from Multiple sequence alignment
2.6 years ago by lieven.sterck 15k
0
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1
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714
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Answer: Answer: Extracting proteome and transcriptome from genome and its corresponding GFF
2.6 years ago by lieven.sterck 15k
3
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0
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1.3k
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Answer: Answer: I'm not sure my Bulk RNAseq read counts extracted from fastq file are correct
2.6 years ago by lieven.sterck 15k
0
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0
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591
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Answer: Answer: Change names of all sequences in a MSA
2.6 years ago by lieven.sterck 15k
1
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1
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1.8k
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Answer: Answer: What is eggnog better than previous annotation in terms of?
2.6 years ago by lieven.sterck 15k
1
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1
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4.0k
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Answer: Answer: What files (fasta, GTF) do I need for RNA seq analysis
2.6 years ago by lieven.sterck 15k
1
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0
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1.9k
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Answer: Answer: Non biology & computer professional interested in bioinformatics
2.6 years ago by lieven.sterck 15k
1
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0
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1.4k
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Answer: Answer: Courses in RNAseq data
2.6 years ago by lieven.sterck 15k
0
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0
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1.0k
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Answer: Answer: Protein filtering for annotation
2.6 years ago by lieven.sterck 15k
2
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0
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2.0k
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Answer: Answer: RNAseq count which strand to use
2.6 years ago by lieven.sterck 15k
1
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1
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2.5k
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Answer: Answer: Splice aware vs splice unaware aligners?
2.6 years ago by lieven.sterck 15k
0
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1
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1.1k
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Answer: Answer: Downloading PE reads from SRA but reads are not split
2.6 years ago by lieven.sterck 15k
1
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1
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1.1k
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Answer: Answer: What does it mean BLASTx in de novo RNAseq analysis?
2.7 years ago by lieven.sterck 15k
1
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1
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1.6k
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Answer: Answer: bbduk can't read file
2.7 years ago by lieven.sterck 15k
1
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1
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1.8k
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Answer: Answer: How can I extract upstream regions in fasta for all blastx hits locally performe
2.7 years ago by lieven.sterck 15k
3
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1
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1.4k
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Answer: Answer: Genome assembly, removal of conting below 300 bp?
2.7 years ago by lieven.sterck 15k
1
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1
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1.0k
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Answer: Answer: Use one few genes instead of reference genome in mapping
2.7 years ago by lieven.sterck 15k
2
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1
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1.4k
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Answer: Answer: How does PacBio Iso -Seq Annotation compare to other pipelines?
2.7 years ago by lieven.sterck 15k
2
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1
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1.7k
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Answer: Answer: "Simplifing" a very fragmented genome for visualisation?
2.7 years ago by lieven.sterck 15k
0
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1
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870
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Answer: Answer: how to get the name of a protein from a sequence?
2.7 years ago by lieven.sterck 15k
1
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0
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1.3k
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Answer: Answer: How to adjust sequence line to 60bp?
2.7 years ago by lieven.sterck 15k
1
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1
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2.1k
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Answer: Answer: Identification of transcription factors from a list of DEGs
2.8 years ago by lieven.sterck 15k
0
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1
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1.2k
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Answer: Answer: How to convert gene names to EC numbers?
2.8 years ago by lieven.sterck 15k
2
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0
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936
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Answer: Answer: Gene prediction methods
2.8 years ago by lieven.sterck 15k
0
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1
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2.2k
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Answer: Answer: When to merge sequencing data from multiple lanes (FastQToSam, SamToFastq, BWA,
2.8 years ago by lieven.sterck 15k
2
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0
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605
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Answer: Answer: Is strand specific library always better for RNA-seq?
2.9 years ago by lieven.sterck 15k
1
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1
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645
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Answer: Answer: RNA-seq analysis
2.9 years ago by lieven.sterck 15k
0
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1
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2.1k
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Answer: Answer: Getting blastn results for the complementary strand
2.9 years ago by lieven.sterck 15k
2
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1
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954
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Answer: Answer: How to perform alternative splicing from RNA Seq data?
2.9 years ago by lieven.sterck 15k
3
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1
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2.1k
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Answer: Answer: Extract CDS from maker gff
2.9 years ago by lieven.sterck 15k
470 results • Page 2 of 10
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