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896
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Comment: Comment: What are the definitions of the BBMerge outinsert table file?
9 months ago by Dave Carlson ★ 1.8k
0
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1
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896
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Comment: Comment: What are the definitions of the BBMerge outinsert table file?
9 months ago by Dave Carlson ★ 1.8k
1
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0
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930
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Comment: Comment: Low mapping percentage
12 months ago by Dave Carlson ★ 1.8k
0
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0
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666
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Comment: Comment: Help with understanding BBduk's behavior
12 months ago by Dave Carlson ★ 1.8k
1
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2
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666
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Help with understanding BBduk's behavior
BBduk kmer
12 months ago by Dave Carlson ★ 1.8k
1
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1
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787
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Comment: Comment: BBduk log and stats appear to be inconsistent
13 months ago by Dave Carlson ★ 1.8k
4
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3
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787
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BBduk log and stats appear to be inconsistent
bbduk bbmap
updated 13 months ago by 142k • written 13 months ago by ★ 1.8k
0
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0
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919
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Answer: Answer: How much resources does HiCanu need to assemble PacBio sequence
13 months ago by Dave Carlson ★ 1.8k
0
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1
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952
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Comment: Comment: Hoe calculate RPKM from RUVr?
13 months ago by Dave Carlson ★ 1.8k
4
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0
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2.6k
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Answer: Answer: Snakemake vs Nextflow Upcoming bioinformatics Project
14 months ago by Dave Carlson ★ 1.8k
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0
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682
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Answer: Answer: Journey from gene id to gene sequence
15 months ago by Dave Carlson ★ 1.8k
2
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0
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1.1k
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Comment: Comment: What is the importance of partitions in phylogenomics analysis ?
16 months ago by Dave Carlson ★ 1.8k
1
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1
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959
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Comment: Comment: Use an annotated transcript in STAR but no .gtf file available
16 months ago by Dave Carlson ★ 1.8k
2
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1
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959
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Answer: Answer: Use an annotated transcript in STAR but no .gtf file available
16 months ago by Dave Carlson ★ 1.8k
2
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1
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1.3k
views
Comment: Comment: How can I check if an RNA-Seq data is stranded (strand-specific) or not?
17 months ago by Dave Carlson ★ 1.8k
1
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0
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564
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Answer: Answer: Structure: not found
18 months ago by Dave Carlson ★ 1.8k
1
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0
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1.0k
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Comment: Comment: runing R script on VCF dile in ubuntu
18 months ago by Dave Carlson ★ 1.8k
1
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1
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2.0k
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Answer: Answer: AlphaFold 2 alternatives
18 months ago by Dave Carlson ★ 1.8k
2
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0
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1.3k
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Comment: Comment: fastqc - typical for Illumina seq?
18 months ago by Dave Carlson ★ 1.8k
2
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0
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557
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Answer: Answer: Quickly examining many MSAs
18 months ago by Dave Carlson ★ 1.8k
0
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1
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1.6k
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Answer: Answer: How to extract the GT from a given sample in a multisample VCF with cyvcf2?
18 months ago by Dave Carlson ★ 1.8k
0
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0
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1.1k
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Comment: Comment: Multiple-way Reciprocal Best BLAST Hits
18 months ago by Dave Carlson ★ 1.8k
0
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1
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985
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Comment: Comment: Does missing data(?) have a significant impact on phylogenetic studies?
19 months ago by Dave Carlson ★ 1.8k
0
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1
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985
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Comment: Comment: Does missing data(?) have a significant impact on phylogenetic studies?
19 months ago by Dave Carlson ★ 1.8k
1
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0
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5.8k
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Comment: Comment: How can I learn create a bioinformatic pipeline?
19 months ago by Dave Carlson ★ 1.8k
0
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1
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1.2k
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Comment: Comment: genotype encoding
20 months ago by Dave Carlson ★ 1.8k
0
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1
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1.2k
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Comment: Comment: genotype encoding
20 months ago by Dave Carlson ★ 1.8k
2
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2
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1.2k
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Answer: Answer: genotype encoding
20 months ago by Dave Carlson ★ 1.8k
0
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1
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815
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Answer: Answer: How do I change the path of the bowtie2 temp file
20 months ago by Dave Carlson ★ 1.8k
1
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0
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837
views
Comment: Comment: How to fix plotMA() error?
20 months ago by Dave Carlson ★ 1.8k
2
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2
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837
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Answer: Answer: How to fix plotMA() error?
20 months ago by Dave Carlson ★ 1.8k
0
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0
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1.4k
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Comment: Comment: In-paralog & out-paralog
20 months ago by Dave Carlson ★ 1.8k
0
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1
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1.4k
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Answer: Answer: In-paralog & out-paralog
20 months ago by Dave Carlson ★ 1.8k
2
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1
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2.5k
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Answer: Answer: phylogeny
updated 4 months ago by 44k • written 20 months ago by ★ 1.8k
0
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1
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1.2k
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Answer: Answer: Best software to edit phylogeny trees
21 months ago by Dave Carlson ★ 1.8k
1
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1
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835
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Comment: Comment: RNASeq analysis without reference genome using Trinity
21 months ago by Dave Carlson ★ 1.8k
1
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1
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1.5k
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Answer: Answer: Calculate inbreeding coefficient out of ROH (Plink)
21 months ago by Dave Carlson ★ 1.8k
1
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0
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598
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Answer: Answer: Identifying reliable regions of reference genomes
21 months ago by Dave Carlson ★ 1.8k
2
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1
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1.1k
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Comment: Comment: Reference genome fasta file
21 months ago by Dave Carlson ★ 1.8k
4
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1
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1.1k
views
Answer: Answer: Reference genome fasta file
21 months ago by Dave Carlson ★ 1.8k
2
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1
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774
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Answer: Answer: Bowtie2 and subprocess issue
22 months ago by Dave Carlson ★ 1.8k
2
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1
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2.0k
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Answer: Answer: How to check Burrows-Wheeler Aligner (BWA) version on my terminal?
22 months ago by Dave Carlson ★ 1.8k
1
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1
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2.1k
views
Answer: Answer: Conda environment perl issue
22 months ago by Dave Carlson ★ 1.8k
2
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0
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2.2k
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Comment: Comment: AF = 0.5 in chrX, VCF of a male
22 months ago by Dave Carlson ★ 1.8k
2
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0
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782
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Answer: Answer: How to create a fasta file using a list of DNA sequences data
22 months ago by Dave Carlson ★ 1.8k
0
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0
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700
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Comment: Comment: VCF to MAF using oncotator
22 months ago by Dave Carlson ★ 1.8k
2
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1
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2.3k
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Comment: Comment: Updating BLAST+ and PATH variable
22 months ago by Dave Carlson ★ 1.8k
3
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1
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2.3k
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Comment: Comment: Updating BLAST+ and PATH variable
22 months ago by Dave Carlson ★ 1.8k
5
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1
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2.3k
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Answer: Answer: Updating BLAST+ and PATH variable
22 months ago by Dave Carlson ★ 1.8k
0
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1
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1.6k
views
Comment: Comment: iqtree output as newick or nexus format
22 months ago by Dave Carlson ★ 1.8k
190 results • Page 2 of 4
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