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Comment: Comment: Snakemake paralellize
12 weeks ago by Eric Lim ★ 2.1k
1
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1
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544
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Comment: Comment: Suggestions for a simpler solution for collecting snakemake rule output in a tex
3 months ago by Eric Lim ★ 2.1k
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1
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1.2k
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Comment: Comment: Snakemake issue with wrappers
5 months ago by Eric Lim ★ 2.1k
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0
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916
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Comment: Comment: Wildcards in Snakemake
6 months ago by Eric Lim ★ 2.1k
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1
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916
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Comment: Comment: Wildcards in Snakemake
6 months ago by Eric Lim ★ 2.1k
1
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0
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710
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Comment: Comment: Identify Alternative Splicing Event using exon and junction count table
9 months ago by Eric Lim ★ 2.1k
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1
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715
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Comment: Comment: take user options before calling snakemake
12 months ago by Eric Lim ★ 2.1k
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1
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873
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Comment: Comment: Do we need replicates for PSI calculation in SUPPA2?
13 months ago by Eric Lim ★ 2.1k
2
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1
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1.7k
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Comment: Comment: how to speed up snakemake workflow
16 months ago by Eric Lim ★ 2.1k
1
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0
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739
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Comment: Comment: Rule all has wrong order
19 months ago by Eric Lim ★ 2.1k
1
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0
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2.1k
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Comment: Comment: Prepare for a job interview in bioinformatics
20 months ago by Eric Lim ★ 2.1k
1
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1
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2.9k
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Comment: Comment: Big difference in estimated duplicate reads between forward and reverse of paire
22 months ago by Eric Lim ★ 2.1k
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1
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1.5k
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Comment: Comment: Understanding percent spliced in
2.1 years ago by Eric Lim ★ 2.1k
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1
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1.3k
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Comment: Comment: Snakemake error in gatk pipeline
2.3 years ago by Eric Lim ★ 2.1k
1
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0
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3.8k
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Comment: Comment: Read bam/cram file with IGV from aws s3
2.3 years ago by Eric Lim ★ 2.1k
1
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0
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597
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Comment: Comment: What happens to the outputs when you update the rule's conda environment
2.3 years ago by Eric Lim ★ 2.1k
3
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1
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1.4k
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Comment: Comment: Snakemake issue
2.3 years ago by Eric Lim ★ 2.1k
1
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1
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2.2k
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Comment: Comment: snakemake how to get or create wildcards from newly generated files
2.3 years ago by Eric Lim ★ 2.1k
1
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0
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2.1k
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Comment: Comment: Anyone know any clever snakemake/SLURM tricks to run a big analysis with limited
2.3 years ago by Eric Lim ★ 2.1k
1
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1
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2.1k
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Comment: Comment: Anyone know any clever snakemake/SLURM tricks to run a big analysis with limited
2.3 years ago by Eric Lim ★ 2.1k
0
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2
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2.9k
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Comment: Comment: Snakemake Megahit error
2.4 years ago by Eric Lim ★ 2.1k
0
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1
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2.9k
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Comment: Comment: Snakemake Megahit error
2.4 years ago by Eric Lim ★ 2.1k
1
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0
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2.0k
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Comment: Comment: Missing Input files Error with snakemake pipeline
2.5 years ago by Eric Lim ★ 2.1k
1
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1
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2.0k
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Comment: Comment: Missing Input files Error with snakemake pipeline
2.5 years ago by Eric Lim ★ 2.1k
1
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0
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2.9k
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Comment: Comment: Snakemake Megahit error
2.5 years ago by Eric Lim ★ 2.1k
0
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0
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647
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Comment: Comment: snakemake input wildcards
2.5 years ago by Eric Lim ★ 2.1k
2
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1
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3.8k
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Comment: Comment: Biopython SeqIO: AttributeError: 'str' object has no attribute 'id'
2.7 years ago by Eric Lim ★ 2.1k
0
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0
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2.2k
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Comment: C: Bioinformatics Server on AWS
4.2 years ago by Eric Lim ★ 2.1k
1
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1
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1.8k
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Comment: C: GSK Data Strategy & Design Expert
4.2 years ago by Eric Lim ★ 2.1k
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0
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1.1k
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Comment: C: Generate list of numbers corresponding to fq reads based on 6-character barcode
4.4 years ago by Eric Lim ★ 2.1k
1
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0
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2.5k
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Comment: C: how to index different genomes with snakemake with different parameters?
4.4 years ago by Eric Lim ★ 2.1k
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0
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1.7k
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Comment: C: LiftOver from b37
4.5 years ago by Eric Lim ★ 2.1k
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0
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1.1k
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Comment: C: Understanding the annotation tag
4.5 years ago by Eric Lim ★ 2.1k
1
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1
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2.9k
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Comment: C: Big difference in estimated duplicate reads between forward and reverse of paire
4.5 years ago by Eric Lim ★ 2.1k
0
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1
reply
2.9k
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Comment: C: Big difference in estimated duplicate reads between forward and reverse of paire
4.5 years ago by Eric Lim ★ 2.1k
0
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0
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8.3k
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Comment: C: snakemake: pipeline failed with MissingOutputException
4.5 years ago by Eric Lim ★ 2.1k
0
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1
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8.3k
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Comment: C: snakemake: pipeline failed with MissingOutputException
4.5 years ago by Eric Lim ★ 2.1k
2
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1
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2.5k
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Comment: C: how to index different genomes with snakemake with different parameters?
4.5 years ago by Eric Lim ★ 2.1k
0
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0
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2.5k
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Comment: C: concatenating FASTQ forward and reverse reads in Snakemake
4.6 years ago by Eric Lim ★ 2.1k
0
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1
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2.5k
views
Comment: C: concatenating FASTQ forward and reverse reads in Snakemake
4.6 years ago by Eric Lim ★ 2.1k
2
votes
1
reply
2.9k
views
Comment: C: snakemake and Star aligner code issue
4.6 years ago by Eric Lim ★ 2.1k
0
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0
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1.1k
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Comment: C: Multiz for human-to-mouse and mouse-to-human don't agree with each other
4.7 years ago by Eric Lim ★ 2.1k
0
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0
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1.6k
views
Comment: C: how to extract unique and the first shared exon in a given gene?
4.7 years ago by Eric Lim ★ 2.1k
0
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1
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1.1k
views
Comment: C: Multiz for human-to-mouse and mouse-to-human don't agree with each other
4.7 years ago by Eric Lim ★ 2.1k
1
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1
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1.4k
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Comment: C: gene prediction without GT-AG splice site bias
4.8 years ago by Eric Lim ★ 2.1k
0
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1
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1.2k
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Comment: C: Error with frame/translation in BioPython?
4.8 years ago by Eric Lim ★ 2.1k
0
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0
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746
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Comment: C: Application suggestions for slackbot
4.9 years ago by Eric Lim ★ 2.1k
1
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1
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1.2k
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Comment: C: Mapping exonic sequences across species
4.9 years ago by Eric Lim ★ 2.1k
0
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1
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1.2k
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Comment: C: Mapping exonic sequences across species
4.9 years ago by Eric Lim ★ 2.1k
0
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1
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2.4k
views
Comment: C: How to mount my data into docker container through -v command?
5.0 years ago by Eric Lim ★ 2.1k
165 results • Page 1 of 4
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