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comments
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346
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Comment:
Comment: Deep Sequencing vs Shallow Sequencing but repeated several times
3 months ago by
d-cameron
★ 2.9k
1
vote
0
replies
851
views
Comment:
Comment: How to whole genome assemble when I have three references
5 months ago by
d-cameron
★ 2.9k
0
votes
1
reply
851
views
Comment:
Comment: How to whole genome assemble when I have three references
5 months ago by
d-cameron
★ 2.9k
1
vote
0
replies
851
views
Comment:
Comment: How to whole genome assemble when I have three references
5 months ago by
d-cameron
★ 2.9k
0
votes
1
reply
851
views
Comment:
Comment: How to whole genome assemble when I have three references
5 months ago by
d-cameron
★ 2.9k
0
votes
0
replies
1.6k
views
Comment:
Comment: paired end mapping with one end being unique and the other end multiple
19 months ago by
d-cameron
★ 2.9k
0
votes
1
reply
1.7k
views
Comment:
Comment: Unaligned Reads From Bowtie2
19 months ago by
d-cameron
★ 2.9k
0
votes
0
replies
1.5k
views
Comment:
Comment: Extracting only soft/hard clipped reads from a bam file
20 months ago by
d-cameron
★ 2.9k
0
votes
0
replies
965
views
Comment:
Comment: SV with identical start and end positions
21 months ago by
d-cameron
★ 2.9k
0
votes
2
replies
965
views
Comment:
Comment: SV with identical start and end positions
21 months ago by
d-cameron
★ 2.9k
0
votes
1
reply
2.2k
views
Comment:
Comment: AF = 0.5 in chrX, VCF of a male
21 months ago by
d-cameron
★ 2.9k
0
votes
1
reply
2.6k
views
Comment:
Comment: Tabix '[E::get_intv] Failed to parse TBX_VCF' error
21 months ago by
d-cameron
★ 2.9k
0
votes
0
replies
433
views
Comment:
Comment: How to bin how many alignments a read maps
24 months ago by
d-cameron
★ 2.9k
0
votes
0
replies
454
views
Comment:
Comment: Detect a sequence without assembling... and counting number of reads?
2.0 years ago by
d-cameron
★ 2.9k
3
votes
2
replies
1.6k
views
Comment:
Comment: paired end mapping with one end being unique and the other end multiple
2.1 years ago by
d-cameron
★ 2.9k
2
votes
0
replies
1.6k
views
Comment:
Comment: paired end mapping with one end being unique and the other end multiple
2.1 years ago by
d-cameron
★ 2.9k
1
vote
0
replies
788
views
Comment:
Comment: Calling variants after using different read alignment programs
2.1 years ago by
d-cameron
★ 2.9k
1
vote
0
replies
2.1k
views
Comment:
Comment: Are not all duplicated reads removed when applying removal duplicated algorithms
2.2 years ago by
d-cameron
★ 2.9k
2
votes
0
replies
4.7k
views
Comment:
Comment: Structural Variants (SV) Manta output interpretation: MantaBND and translocation
2.2 years ago by
d-cameron
★ 2.9k
0
votes
0
replies
4.4k
views
Comment:
Comment: GRIDSS: the Genomic Rearrangement IDentification Software Suite
2.7 years ago by
d-cameron
★ 2.9k
0
votes
0
replies
1.8k
views
Comment:
Comment: Issue with samtools reheader, bam file
2.9 years ago by
d-cameron
★ 2.9k
0
votes
0
replies
856
views
Comment:
Comment: adding a contig fasta to reference genome fasta
2.9 years ago by
d-cameron
★ 2.9k
0
votes
0
replies
1.8k
views
Comment:
Comment: Issue with samtools reheader, bam file
2.9 years ago by
d-cameron
★ 2.9k
0
votes
0
replies
3.2k
views
Comment:
Comment: BAM File, Change chromosome notation
2.9 years ago by
d-cameron
★ 2.9k
0
votes
0
replies
5.4k
views
Comment:
Comment: BWA MEM Definition of a Primary Alignment
3.0 years ago by
d-cameron
★ 2.9k
0
votes
1
reply
10k
views
Comment:
Comment: samtools multithreads
3.1 years ago by
d-cameron
★ 2.9k
1
vote
0
replies
1.9k
views
Comment:
C: Revert bam to fastq
3.6 years ago by
d-cameron
★ 2.9k
0
votes
1
reply
1.1k
views
Comment:
A: what the mean of Genomic content
3.7 years ago by
d-cameron
★ 2.9k
0
votes
0
replies
981
views
Comment:
C: HPV EBV typing from cancer genome data
3.8 years ago by
d-cameron
★ 2.9k
0
votes
0
replies
2.1k
views
Comment:
C: how to output the best alignment rather than multiple alignments for each read i
4.1 years ago by
d-cameron
★ 2.9k
0
votes
0
replies
1.6k
views
Comment:
C: Why Samtools view don't extract sequence out of the given region?
4.1 years ago by
d-cameron
★ 2.9k
0
votes
0
replies
1.5k
views
Comment:
C: The center in scatter plot generated by CNVkit looks off
4.1 years ago by
d-cameron
★ 2.9k
0
votes
1
reply
1.5k
views
Comment:
C: The center in scatter plot generated by CNVkit looks off
4.1 years ago by
d-cameron
★ 2.9k
0
votes
1
reply
1.5k
views
Comment:
C: The center in scatter plot generated by CNVkit looks off
4.1 years ago by
d-cameron
★ 2.9k
0
votes
0
replies
957
views
Comment:
C: Extract SV indicating pair-end reads
4.1 years ago by
d-cameron
★ 2.9k
0
votes
0
replies
957
views
Comment:
C: Extract SV indicating pair-end reads
4.1 years ago by
d-cameron
★ 2.9k
0
votes
0
replies
2.2k
views
Comment:
C: fusion detection for DNA Sequencing data
4.1 years ago by
d-cameron
★ 2.9k
0
votes
1
reply
6.1k
views
Comment:
C: bwa mem memory allocation, threads and nodes
4.3 years ago by
d-cameron
★ 2.9k
0
votes
1
reply
1.7k
views
Comment:
C: Number of Tandem and Interspersed duplications
4.7 years ago by
d-cameron
★ 2.9k
0
votes
1
reply
1.7k
views
Comment:
C: Number of Tandem and Interspersed duplications
4.7 years ago by
d-cameron
★ 2.9k
0
votes
0
replies
2.5k
views
Comment:
C: identifying transgene insertion site in WGS
4.8 years ago by
d-cameron
★ 2.9k
0
votes
0
replies
5.4k
views
Comment:
C: BWA MEM Definition of a Primary Alignment
4.9 years ago by
d-cameron
★ 2.9k
0
votes
1
reply
2.5k
views
Comment:
C: identifying transgene insertion site in WGS
5.1 years ago by
d-cameron
★ 2.9k
0
votes
0
replies
1.3k
views
Comment:
C: Extract Hard-clipped and soft-clipped values from fifth column
5.4 years ago by
d-cameron
★ 2.9k
0
votes
0
replies
1.2k
views
Comment:
C: Help with .sam files _1,_2 from bowtie2 output into svDetect
5.4 years ago by
d-cameron
★ 2.9k
2
votes
1
reply
2.1k
views
Comment:
C: How to check breakpoint after detecting a CNV.
5.4 years ago by
d-cameron
★ 2.9k
0
votes
0
replies
15k
views
Comment:
C: What does <*> mean in a vcf file?
5.4 years ago by
d-cameron
★ 2.9k
0
votes
1
reply
12k
views
Comment:
C: annotation of SV (structural variants)
5.5 years ago by
d-cameron
★ 2.9k
0
votes
0
replies
6.5k
views
Comment:
C: NGS data simulation: VarSim or BAMSurgeon?
5.5 years ago by
d-cameron
★ 2.9k
0
votes
1
reply
1.4k
views
Comment:
C: Assembling a sequence from the pairs of letters (X,Y)
5.9 years ago by
d-cameron
★ 2.9k
168 results • Page
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