Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
0
replies
1.6k
views
Comment: Comment: Require suggestion for python tools that can implement VCF file into FASTA files
17 months ago by 4galaxy77 2.8k
0
votes
0
replies
1.4k
views
Answer: Answer: GWAS and vcf files. Lacking Phenotype
17 months ago by 4galaxy77 2.8k
0
votes
1
reply
1.4k
views
Comment: Comment: GWAS and vcf files. Lacking Phenotype
17 months ago by 4galaxy77 2.8k
0
votes
1
reply
1.6k
views
Comment: Comment: Require suggestion for python tools that can implement VCF file into FASTA files
17 months ago by 4galaxy77 2.8k
0
votes
1
reply
1.2k
views
Comment: Comment: Shannon's Entropy by Sliding Window in R
17 months ago by 4galaxy77 2.8k
0
votes
0
replies
1.2k
views
Comment: Comment: Shannon's Entropy by Sliding Window in R
17 months ago by 4galaxy77 2.8k
0
votes
1
reply
1.3k
views
Comment: Comment: Are package downgrades a necessary evil in Conda?
17 months ago by 4galaxy77 2.8k
6
votes
7
replies
1.3k
views
Are package downgrades a necessary evil in Conda?
environments conda
updated 17 months ago by 142k • written 17 months ago by 2.8k
2
votes
0
replies
1.3k
views
Comment: Comment: How to apply bioinformatic in vaccine design?
18 months ago by 4galaxy77 2.8k
1
vote
1
reply
505
views
Comment: Comment: How to get the number of significant loci from GWAS
18 months ago by 4galaxy77 2.8k
0
votes
0
replies
1.7k
views
Comment: Comment: Opening a VCF.bgz file in python
18 months ago by 4galaxy77 2.8k
0
votes
1
reply
1.7k
views
Comment: Comment: Opening a VCF.bgz file in python
18 months ago by 4galaxy77 2.8k
0
votes
1
reply
1.7k
views
Comment: Comment: Opening a VCF.bgz file in python
18 months ago by 4galaxy77 2.8k
1
vote
0
replies
1.0k
views
Comment: Comment: How to extract specific SNPs from a vcf file and create new a one consisting of
18 months ago by 4galaxy77 2.8k
2
votes
0
replies
2.8k
views
Comment: Comment: Filter
18 months ago by 4galaxy77 2.8k
3
votes
1
reply
2.8k
views
Answer: Answer: Why doesn't grep work when used on a gzipped (.gz) VCF file
18 months ago by 4galaxy77 2.8k
1
vote
0
replies
690
views
Answer: Answer: phasing genotype
18 months ago by 4galaxy77 2.8k
1
vote
0
replies
980
views
Comment: Comment: How can I convert plink (.bed, .fam and .bim) fileset to .pgen file format?
18 months ago by 4galaxy77 2.8k
1
vote
0
replies
2.2k
views
Comment: Comment: Count missing and non missing values in a VCF file
18 months ago by 4galaxy77 2.8k
1
vote
0
replies
917
views
Comment: Comment: Making my python code better
19 months ago by 4galaxy77 2.8k
2
votes
1
reply
1.1k
views
Comment: Comment: Where can I find the genetic map for GRCh37 to phase genotypes on SHAPEIT2
19 months ago by 4galaxy77 2.8k
0
votes
1
reply
1.1k
views
Comment: Comment: Where can I find the genetic map for GRCh37 to phase genotypes on SHAPEIT2
19 months ago by 4galaxy77 2.8k
0
votes
0
replies
882
views
Comment: Comment: bcftools merge doesn't recalculate AF
19 months ago by 4galaxy77 2.8k
0
votes
3
replies
948
views
Comment: Comment: downlaod snp from UK Biobank imputed snp chr1 ukb22828 file
19 months ago by 4galaxy77 2.8k
0
votes
0
replies
1.2k
views
Answer: Answer: how to calculate %of missing genotype in vcf file
20 months ago by 4galaxy77 2.8k
4
votes
1
reply
1.3k
views
Comment: Comment: VCF to human friendly form?
20 months ago by 4galaxy77 2.8k
1
vote
1
reply
1.9k
views
Answer: Answer: Number of samples and variants in .vcf file
20 months ago by 4galaxy77 2.8k
0
votes
1
reply
2.2k
views
Comment: Comment: fast way to get last position in a large indexed VCF?
20 months ago by 4galaxy77 2.8k
4
votes
1
reply
2.6k
views
Answer: Answer: Can bioinformatics Phds be completely or almost completely done remotely?
20 months ago by 4galaxy77 2.8k
0
votes
0
replies
322
views
Lifting over bed file with REF ALT and RSIDs
liftover
20 months ago by 4galaxy77 2.8k
0
votes
0
replies
708
views
Comment: Comment: Align plink to fasta
20 months ago by 4galaxy77 2.8k
1
vote
1
reply
2.9k
views
Comment: Comment: Commercial software for genomics / NGS / bioinformatics
20 months ago by 4galaxy77 2.8k
0
votes
0
replies
1.6k
views
Comment: Comment: How to sort vcf by an INFO column score
20 months ago by 4galaxy77 2.8k
0
votes
1
reply
1.6k
views
Comment: Comment: How to sort vcf by an INFO column score
20 months ago by 4galaxy77 2.8k
0
votes
1
reply
712
views
Comment: Comment: Stringtie - segmentation fault
20 months ago by 4galaxy77 2.8k
1
vote
0
replies
390
views
Answer: Answer: Open human database with RNA sequencing and full genome/exome sequencing (rna-se
20 months ago by 4galaxy77 2.8k
1
vote
1
reply
1.1k
views
Answer: Answer: Can you not phase exome data?
20 months ago by 4galaxy77 2.8k
2
votes
1
reply
1.4k
views
Answer: Answer: PlotPCA shows small plot in plot section of R studio
20 months ago by 4galaxy77 2.8k
0
votes
0
replies
2.3k
views
Comment: Comment: Impute genotype probabilities with BEAGLE
20 months ago by 4galaxy77 2.8k
0
votes
1
reply
2.3k
views
Comment: Comment: Impute genotype probabilities with BEAGLE
21 months ago by 4galaxy77 2.8k
0
votes
1
reply
2.3k
views
Comment: Comment: Impute genotype probabilities with BEAGLE
21 months ago by 4galaxy77 2.8k
1
vote
2
replies
870
views
Comment: Comment: Merge 2 imputation reference panels
21 months ago by 4galaxy77 2.8k
0
votes
0
replies
1.5k
views
Comment: Comment: Memory Issue while doing single cell seq analysis
21 months ago by 4galaxy77 2.8k
0
votes
0
replies
2.4k
views
Comment: Comment: Why isn't GWAS used in oncology?
21 months ago by 4galaxy77 2.8k
1
vote
1
reply
442
views
Converting RSIDs in the HLA region (e.g.) HLA-A*:01:01g-B*08:01 format?
SNP HLA rsid
updated 21 months ago by 142k • written 21 months ago by 2.8k
0
votes
0
replies
593
views
Comment: Comment: What does adjusted p value mean in GO overrepresentation analysis? [clusterProfi
21 months ago by 4galaxy77 2.8k
0
votes
0
replies
942
views
Comment: Comment: The problem occurs when I use SHAPEIT, the problem is as follows
21 months ago by 4galaxy77 2.8k
0
votes
1
reply
942
views
Comment: Comment: The problem occurs when I use SHAPEIT, the problem is as follows
21 months ago by 4galaxy77 2.8k
0
votes
1
reply
555
views
Comment: Comment: Downstream Analysis of snvs
21 months ago by 4galaxy77 2.8k
0
votes
0
replies
872
views
Comment: Comment: How to Extract SNPs from Linkage Disequilibrium data with r2 > 0.6 threshold?
21 months ago by 4galaxy77 2.8k
441 results • Page 2 of 9
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6