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0
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2
replies
1.7k
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Comment:
Comment: bedops alternative for bedtools -unionbedg ?
8 months ago by
Alex Reynolds
35k
0
votes
1
reply
1.1k
views
Comment:
Comment: Neither pysam nor samtools reading HTTPS-sourced BAM file correctly
8 months ago by
Alex Reynolds
35k
3
votes
5
replies
1.1k
views
Neither pysam nor samtools reading HTTPS-sourced BAM file correctly
bam
pysam
samtools
updated 8 months ago by
Istvan Albert
100k • written 8 months ago by
Alex Reynolds
35k
0
votes
0
replies
3.8k
views
Comment:
Comment: Reproduce the article "The complete sequence of a human genome."
8 months ago by
Alex Reynolds
35k
5
votes
2
replies
3.8k
views
Answer:
Answer: Reproduce the article "The complete sequence of a human genome."
8 months ago by
Alex Reynolds
35k
0
votes
0
replies
1.7k
views
Comment:
Comment: bedops alternative for bedtools -unionbedg ?
8 months ago by
Alex Reynolds
35k
3
votes
2
replies
1.7k
views
Answer:
Answer: bedops alternative for bedtools -unionbedg ?
7 months ago by
Alex Reynolds
35k
0
votes
1
reply
1.5k
views
Answer:
Answer: Is Bioinformatics a Professional Degree?
8 months ago by
Alex Reynolds
35k
0
votes
0
replies
883
views
Answer:
Answer: Scanning a genomic region for TFBS
9 months ago by
Alex Reynolds
35k
0
votes
0
replies
609
views
Answer:
Answer: Identify binding motifs within large super enhancer region
9 months ago by
Alex Reynolds
35k
1
vote
0
replies
1.6k
views
Comment:
Comment: What happens when a bioinformatician has his own genome sequenced for $300?
10 months ago by
Alex Reynolds
35k
5
votes
0
replies
1.6k
views
Comment:
Comment: What happens when a bioinformatician has his own genome sequenced for $300?
10 months ago by
Alex Reynolds
35k
0
votes
0
replies
904
views
Answer:
Answer: BED files
11 months ago by
Alex Reynolds
35k
0
votes
0
replies
3.4k
views
Comment:
Comment: Decoding MM and ML tags in .SAM file
11 months ago by
Alex Reynolds
35k
1
vote
1
reply
684
views
Answer:
Answer: how to intersect multiple bed files and get results in uncollapsed genomic inter
10 months ago by
Alex Reynolds
35k
0
votes
0
replies
363
views
LAD/TAD and recombination hotspot data
hotspot
recombination
lad
tad
11 months ago by
Alex Reynolds
35k
1
vote
2
replies
3.4k
views
Answer:
Answer: Decoding MM and ML tags in .SAM file
9 months ago by
Alex Reynolds
35k
3
votes
4
replies
885
views
Fast BAM header editing
bam
updated 11 months ago by
cmdcolin
★ 3.8k • written 11 months ago by
Alex Reynolds
35k
0
votes
0
replies
885
views
Comment:
Comment: Fast BAM header editing
11 months ago by
Alex Reynolds
35k
0
votes
1
reply
1.7k
views
Comment:
Comment: Finding TF motifs enriched in series of ATAC-seq peaks (using fimo?)
11 months ago by
Alex Reynolds
35k
1
vote
1
reply
1.7k
views
Comment:
Comment: Finding TF motifs enriched in series of ATAC-seq peaks (using fimo?)
11 months ago by
Alex Reynolds
35k
1
vote
1
reply
1.7k
views
Answer:
Answer: Finding TF motifs enriched in series of ATAC-seq peaks (using fimo?)
11 months ago by
Alex Reynolds
35k
0
votes
1
reply
645
views
Answer:
Answer: Does it possible to know what are the adjacent genes up to 1000bp upstream and
13 months ago by
Alex Reynolds
35k
0
votes
1
reply
2.2k
views
Comment:
Comment: gtf2bed not converting to bed
13 months ago by
Alex Reynolds
35k
1
vote
1
reply
2.2k
views
Comment:
Comment: gtf2bed not converting to bed
13 months ago by
Alex Reynolds
35k
0
votes
2
replies
2.2k
views
Comment:
Comment: gtf2bed not converting to bed
13 months ago by
Alex Reynolds
35k
2
votes
0
replies
2.2k
views
Answer:
Answer: gtf2bed not converting to bed
13 months ago by
Alex Reynolds
35k
1
vote
0
replies
599
views
Answer:
Answer: How do you get functional/biological role of motifs?
15 months ago by
Alex Reynolds
35k
0
votes
0
replies
978
views
Comment:
Comment: Merging and intersecting genomic ranges for an indefinite number of files
16 months ago by
Alex Reynolds
35k
0
votes
0
replies
978
views
Answer:
Answer: Merging and intersecting genomic ranges for an indefinite number of files
16 months ago by
Alex Reynolds
35k
0
votes
1
reply
978
views
Answer:
Answer: Merging and intersecting genomic ranges for an indefinite number of files
16 months ago by
Alex Reynolds
35k
2
votes
1
reply
934
views
Answer:
Answer: How can I use nohup command when filtering SNPs?
17 months ago by
Alex Reynolds
35k
1
vote
0
replies
1.3k
views
Answer:
Answer: Bedtools merge but only if intersection exists
17 months ago by
Alex Reynolds
35k
0
votes
0
replies
529
views
Comment:
Comment: trackBrowser: Visualization of sequencing data within a given genome region
18 months ago by
Alex Reynolds
35k
0
votes
0
replies
9.3k
views
Comment:
Comment: Laptops for bioinformatics
18 months ago by
Alex Reynolds
35k
1
vote
1
reply
1.7k
views
Comment:
Comment: How to find overlapping regions in a single bed file
19 months ago by
Alex Reynolds
35k
1
vote
1
reply
1.7k
views
Answer:
Answer: How to find overlapping regions in a single bed file
20 months ago by
Alex Reynolds
35k
0
votes
0
replies
893
views
Comment:
Comment: Unable to install bedops and bedtools on windows 11
20 months ago by
Alex Reynolds
35k
0
votes
0
replies
1.7k
views
Comment:
Comment: Count regions that overlap with python
21 months ago by
Alex Reynolds
35k
0
votes
0
replies
1.7k
views
Comment:
Comment: Count regions that overlap with python
21 months ago by
Alex Reynolds
35k
0
votes
1
reply
1.7k
views
Answer:
Answer: Count regions that overlap with python
21 months ago by
Alex Reynolds
35k
2
votes
0
replies
2.3k
views
Answer:
Answer: Best formats for storing large amounts of data for random access
21 months ago by
Alex Reynolds
35k
0
votes
0
replies
477
views
Answer:
Answer: Visualization of trascription factor family grouped by biological function
21 months ago by
Alex Reynolds
35k
1
vote
0
replies
57k
views
Comment:
Comment: How Can I Know The Length Of Mapped Reads From Bam File?
22 months ago by
Alex Reynolds
35k
1
vote
0
replies
2.7k
views
Answer:
Answer: GFF to BED conversion
22 months ago by
Alex Reynolds
35k
2
votes
1
reply
1.2k
views
Answer:
Answer: Mapping chromosome location to gene ID
23 months ago by
Alex Reynolds
35k
0
votes
0
replies
823
views
Answer:
Answer: Comparing bed files for shifts and enlargements
23 months ago by
Alex Reynolds
35k
1
vote
0
replies
1.8k
views
Comment:
Comment: qualimap - bed file error - BED format error, there should be at least 6 fields.
23 months ago by
Alex Reynolds
35k
0
votes
0
replies
1.4k
views
Answer:
Answer: How to create bed file from list of variants with indels and bp values
23 months ago by
Alex Reynolds
35k
0
votes
1
reply
1.8k
views
Comment:
Comment: sliding windows over genome
23 months ago by
Alex Reynolds
35k
2,874 results • Page
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