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Avi Srivastava
Avi Srivastava
Reputation:
130
Joined:
11.0 years ago
Last seen:
2.1 years ago
Location:
United States
Twitter:
k3yavi
Latest posts by user
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Answer: Answer: ArchRtoSignac
written by Avi Srivastava Avi Srivastava
1 vote
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Comment: Comment: Cellular Barcode detection in CellRanger vs other methods such as Alevin
written by Avi Srivastava Avi Srivastava
5 votes
1 reply
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Answer: Answer: Cellular Barcode detection in CellRanger vs other methods such as Alevin
written by Avi Srivastava Avi Srivastava
1 vote
1 reply
1 view
Answer: A: gene counts in Seurat after RunCCA() and AlignSubspace()
written by Avi Srivastava Avi Srivastava
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Comment: C: how to map UCSC isoform id to its isoform symbols?
written by Avi Srivastava Avi Srivastava
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Comment: C: Tool: Exon file creation for GlimmerHMM training set
written by Avi Srivastava Avi Srivastava
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1 reply
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Answer: A: Tool: Exon file creation for GlimmerHMM training set
written by Avi Srivastava Avi Srivastava
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1 reply
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Comment: C: Combine large number of RSEM outputs into a single matrix
written by Avi Srivastava Avi Srivastava
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Answer: A: RSEM error: Could not locate a Bowtie index corresponding to basename, The SAM/B
written by Avi Srivastava Avi Srivastava
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Comment: Comment: Fastest way from SRA to fastq PE reads
updated by Ram Ram • written by Avi Srivastava Avi Srivastava
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Comment: Comment: Fastest way from SRA to fastq PE reads
updated by Ram Ram • written by Avi Srivastava Avi Srivastava
0 votes
1 reply
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Answer: Answer: Fastest way from SRA to fastq PE reads
updated by Ram Ram • written by Avi Srivastava Avi Srivastava
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Comment: C: Fastest way from SRA to fastq PE reads
written by Avi Srivastava Avi Srivastava
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1 reply
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Comment: Comment: Fastest way from SRA to fastq PE reads
updated by Ram Ram • written by Avi Srivastava Avi Srivastava
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1 reply
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Comment: C: Fastest way from SRA to fastq PE reads
written by Avi Srivastava Avi Srivastava
3 votes
11 replies
5.8K views
Forum: Fastest way from SRA to fastq PE reads
fastq fastq-dump sra vdb-dump rna-seq
updated by Ram Ram • written by Avi Srivastava Avi Srivastava
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1 reply
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Answer: A: RefSeq Ids(NM*, NR*) to ensemble transcript Ids (ENST*)
written by Avi Srivastava Avi Srivastava
1 vote
4 replies
10K views
RefSeq Ids(NM*, NR*) to ensemble transcript Ids (ENST*)
rna-seq
updated by Ram Ram • written by Avi Srivastava Avi Srivastava
2 votes
1 reply
2.5K views
Bowtie2 --strata problem
bowtie2 strata
updated by Antonio Camargo Antonio Camargo • written by Avi Srivastava Avi Srivastava
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