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Answer: Answer: scRNA cluster mapping comparision derived from two different analysis
18 months ago by igor 13k
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652
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Answer: Answer: Msigdb GO:BP
23 months ago by igor 13k
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1.6k
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Answer: Answer: scRNA-seq doublets with less features and UMIs than singlets? How?
2.4 years ago by igor 13k
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598
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Answer: Answer: Does Haplotypecaller of GATK find all the mutations?
2.5 years ago by igor 13k
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2.8k
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Answer: Answer: Calculation of gene coverage from BAM file
2.5 years ago by igor 13k
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20k
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Answer: Answer: Cell Type Marker Databases?
2.5 years ago by igor 13k
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2.3k
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Answer: Answer: ScarHRD
2.6 years ago by igor 13k
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1
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3.8k
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Answer: Answer: Can I perform scRNAseq data integration without loosing features?
2.8 years ago by igor 13k
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1.2k
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Answer: A: Annotate PBMC scRNA-seq data
3.3 years ago by igor 13k
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1
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1.8k
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Answer: A: Using seurat FindClusters on the tSNE embeddings
3.3 years ago by igor 13k
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1.1k
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Answer: A: Pros/cons of cell hashing
3.4 years ago by igor 13k
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1.3k
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Answer: A: Why does it make sense to use gene symbols instead of gene ids in enrichment sof
3.4 years ago by igor 13k
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825
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Answer: A: <5 genes as markers for scRNA Cluster?
3.4 years ago by igor 13k
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4.0k
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Answer: A: Integrating two Seurat Objects
3.4 years ago by igor 13k
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1.7k
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Answer: A: Estimation of Copy Number of alterations(CNA) in Sc-RNA Seq data
3.4 years ago by igor 13k
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624
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Answer: A: Do different cells transcribe different amounts of gene data?
3.4 years ago by igor 13k
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709
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Answer: A: "Bias" in NGS sequencing processing
3.4 years ago by igor 13k
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1.1k
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Answer: A: GDC TCGA LUAD dataset iCluster.group parameter
3.4 years ago by igor 13k
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4.8k
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Answer: A: RNAseq RSEM and featurecounts
3.5 years ago by igor 13k
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1.6k
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Answer: A: Tools for hard trimming?
3.5 years ago by igor 13k
2
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1
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1.9k
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Answer: A: Applying batch correction to single-cell RNA-seq in diffferent time points
3.7 years ago by igor 13k
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801
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Answer: A: Detecting aneuploidy in sequencing data or copy number profile?
3.7 years ago by igor 13k
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2.3k
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Answer: C: Paired end sequencing in case of a short biological insert
3.7 years ago by igor 13k
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846
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Answer: A: nags.plot.r outputs flat graphs and no results
3.8 years ago by igor 13k
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1
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1.9k
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Answer: C: How to compare VCF files called from different reference genomes?
3.8 years ago by igor 13k
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1
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695
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Answer: A: 10X single-cell Seuart object
3.8 years ago by igor 13k
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2.5k
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Answer: A: RSEM isoform.results outputs for edgeR
3.8 years ago by igor 13k
3
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1
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15k
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Answer: A: Cluster sub-set analysis using Seurat
3.8 years ago by igor 13k
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823
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Answer: A: Any up-to-date RNA-Seq Analysis Training/Courses/Papers (July 2020)?
3.8 years ago by igor 13k
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0
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10k
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Answer: A: Detecting copy number alterations based on RNA-seq data
3.8 years ago by igor 13k
2
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2.2k
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Answer: A: mouse chrY centromere location
3.8 years ago by igor 13k
3
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0
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1.3k
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Answer: A: How to find out p-value format in chip-seq .bed files from GEO
3.9 years ago by igor 13k
2
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0
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705
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Answer: C: Differences when genome assembly changes in Kallisto
3.9 years ago by igor 13k
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943
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Answer: A: How to generate high-resolution genome track?
3.9 years ago by igor 13k
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983
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Answer: A: Identifying appearance or disappearance of cell populations between WT and Mut s
3.9 years ago by igor 13k
3
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3
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3.8k
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Answer: A: SingleR for integrated scRNA-seq analysis
3.9 years ago by igor 13k
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0
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4.9k
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Answer: A: retrieve TPM matrix from raw counts matrix or DESeq2 object dds
3.9 years ago by igor 13k
2
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1
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1.5k
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Answer: A: KEGG pathway gene lists differ between sources
3.9 years ago by igor 13k
2
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2
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7.0k
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Answer: A: Using limma for scRNAseq data
3.9 years ago by igor 13k
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1
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4.7k
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Answer: A: best STAR options for miRNA mapping?
4.0 years ago by igor 13k
2
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0
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2.6k
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Answer: A: GSEA and IPA: alternative or complementary?
4.0 years ago by igor 13k
2
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2
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1.1k
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Answer: A: identify highly mutated regions in WES/WGS samples
4.0 years ago by igor 13k
1
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0
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1.7k
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Answer: A: best package for DEG analysis from scRNA-seq data
4.0 years ago by igor 13k
3
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0
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1.2k
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Answer: A: How to subset DESeq2 results
4.0 years ago by igor 13k
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1
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1.3k
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Answer: A: Mapping canine whole genome sequencing to camfam3 reference genome on BWA-MEM
4.0 years ago by igor 13k
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1
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3.0k
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Answer: A: 10x Single cell data analysis with Monocle
4.0 years ago by igor 13k
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1
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1.9k
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Answer: A: Is there a single cell RNAseq equivalent of GTEx or TCGA?
4.0 years ago by igor 13k
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12k
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Answer: A: TMB Tumor Mutation Burden
4.0 years ago by igor 13k
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1.2k
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Answer: A: RNA-seq data for binary classification problem
4.0 years ago by igor 13k
2
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0
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2.2k
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Answer: A: Which programming langauge shall I start as a beginner in Bioinformatics
4.0 years ago by igor 13k
457 results • Page 1 of 10
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