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alolex
alolex
Reputation:
960
Joined:
11.2 years ago
Last seen:
7.3 years ago
Location:
United States

I am a Bioinformatics Specialist with an educational background in Computer Science and extensive experience with analyzing microarray and HTS data.  I am also very familiar with accessing and analyzing public and private data from The Cancer Genome Atlas (TCGA).  I love to program in R and bash--bash mostly because it can weave together programs written in any language to create seamless automated workflows.  

Latest posts by user
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Comment: C: Extract Sub-Set Of Regions From Vcf File
written by alolex alolex
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Comment: C: How To Convert Vcf File To Plink Ped Format?
written by alolex alolex
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Comment: C: How do you define inter-disciplinary communication, how important are these skil
updated by Ram Ram • written by alolex alolex
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Forum: How do you define inter-disciplinary communication, how important are these skills in your job and how frequently do you use them?
communication-skills
updated by Ram Ram • written by alolex alolex
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Comment: Comment: how I can put bowtie2 with tophat2 in the path?
updated by Ram Ram • written by alolex alolex
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Comment: Comment: Are there any workshops which are tailored to non-beginners/intermediate bioinfo
updated by Ram Ram • written by alolex alolex
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Answer: A: Cancer cell line WGS
updated by Ram Ram • written by alolex alolex
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Answer: Answer: Needed appropriate journal to submit my paper
updated by Ram Ram • written by alolex alolex
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Answer: Answer: Draw multiple heatmaps
updated by Ram Ram • written by alolex alolex
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Answer: Answer: How to filter genes by gene size
updated by Ram Ram • written by alolex alolex
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Comment: Comment: Why is DESeq a better method for finding highly upregulated and downregulated ge
updated by Ram Ram • written by alolex alolex
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Comment: Comment: Converting full Protein names into Gene ID
updated by Ram Ram • written by alolex alolex
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Answer: Answer: Why is DESeq a better method for finding highly upregulated and downregulated ge
updated by Ram Ram • written by alolex alolex
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Answer: Answer: Calculate FPKM value from bam files
updated by Ram Ram • written by alolex alolex
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Comment: Comment: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
updated by Ram Ram • written by alolex alolex
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Comment: Comment: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
updated by Ram Ram • written by alolex alolex
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Answer: Answer: Methylation scores from TCGA
updated by Ram Ram • written by alolex alolex
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Comment: Comment: Is possible to computationally determine inhibitor of protein-protein interactio
updated by Ram Ram • written by alolex alolex
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Answer: Answer: Gene Identifiers and Databases
updated by Ram Ram • written by alolex alolex
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Comment: C: What Are The Most Common Stupid Mistakes In Bioinformatics?
updated by Ram Ram • written by alolex alolex
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