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Comment: Comment: Faster Needleman-Wunsch rapid global alignment of two sequences?
3 days ago by b.contreras.moreira ▴ 200
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485
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Answer: Answer: Faster Needleman-Wunsch rapid global alignment of two sequences?
3 days ago by b.contreras.moreira ▴ 200
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365
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Answer: Answer: TFs and Gene databases
11 days ago by b.contreras.moreira ▴ 200
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458
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Answer: Answer: What purposes can TPM values be used for?
17 days ago by b.contreras.moreira ▴ 200
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401
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Answer: Answer: Hide positions in alignment with 99% "–" characters to ignore single sequence in
25 days ago by b.contreras.moreira ▴ 200
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339
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Comment: Comment: How to calculate identity percentage between proteins contained in a FASTA file?
26 days ago by b.contreras.moreira ▴ 200
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1
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762
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Answer: Answer: Mapping cDNA sequence of a single gene to a genome not hosted at UCSC server (wi
4 weeks ago by b.contreras.moreira ▴ 200
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552
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Comment: Comment: Odd results with BLAST remote
4 weeks ago by b.contreras.moreira ▴ 200
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2
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552
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Answer: Answer: Odd results with BLAST remote
4 weeks ago by b.contreras.moreira ▴ 200
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1
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306
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Answer: Answer: Beagle imputation
5 weeks ago by b.contreras.moreira ▴ 200
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614
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Comment: Comment: NCBI MEGABLAST versus UCSC BLAT
5 weeks ago by b.contreras.moreira ▴ 200
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614
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Answer: Answer: NCBI MEGABLAST versus UCSC BLAT
5 weeks ago by b.contreras.moreira ▴ 200
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2
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743
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Answer: Answer: How to BLAST more than 5 sequences against UniProt database?
6 weeks ago by b.contreras.moreira ▴ 200
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1.7k
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Comment: Comment: error when running phg create-maf-vcf to build a built practical haplotype graph
6 weeks ago by b.contreras.moreira ▴ 200
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1.7k
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Comment: Comment: error when running phg create-maf-vcf to build a built practical haplotype graph
7 weeks ago by b.contreras.moreira ▴ 200
1
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0
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621
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Comment: Comment: Should I use Dfam or a custom repetitve elements library (from PlantRep) as a re
7 weeks ago by b.contreras.moreira ▴ 200
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2
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600
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Answer: Answer: Pan genome of plant
7 weeks ago by b.contreras.moreira ▴ 200
1
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1
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621
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Answer: Answer: Should I use Dfam or a custom repetitve elements library (from PlantRep) as a re
7 weeks ago by b.contreras.moreira ▴ 200
0
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1
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1.7k
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Comment: Comment: error when running phg create-maf-vcf to build a built practical haplotype graph
7 weeks ago by b.contreras.moreira ▴ 200
0
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1
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1.7k
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Comment: Comment: error when running phg create-maf-vcf to build a built practical haplotype graph
8 weeks ago by b.contreras.moreira ▴ 200
2
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18
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1.7k
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error when running phg create-maf-vcf to build a built practical haplotype graph (v2)
pangenome phg_v2 plants PHG
6 weeks ago by b.contreras.moreira ▴ 200
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1.7k
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Comment: Comment: error when running phg create-maf-vcf to build a built practical haplotype graph
8 weeks ago by b.contreras.moreira ▴ 200
0
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1
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1.7k
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Comment: Comment: error when running phg create-maf-vcf to build a built practical haplotype graph
8 weeks ago by b.contreras.moreira ▴ 200
0
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1
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1.7k
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Comment: Comment: error when running phg create-maf-vcf to build a built practical haplotype graph
8 weeks ago by b.contreras.moreira ▴ 200
0
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1
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1.7k
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Comment: Comment: error when running phg create-maf-vcf to build a built practical haplotype graph
8 weeks ago by b.contreras.moreira ▴ 200
1
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1
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233
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adding new assemblies to previously built practical haplotype graph (v2)
pangenome phg_v2 plants PHG
updated 8 weeks ago by ▴ 420 • written 8 weeks ago by ▴ 200
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251
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Answer: Answer: converting VCF files to TSV file
9 weeks ago by b.contreras.moreira ▴ 200
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0
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800
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Answer: Answer: Intersect gene IDs list and GFF3 to get the annotation.
9 weeks ago by b.contreras.moreira ▴ 200
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1
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743
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Comment: Comment: Errors running PHG MakeInitialPHGDBPipelinePlugin (**UNASSIGNED**)
9 weeks ago by b.contreras.moreira ▴ 200
0
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1
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743
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Comment: Comment: Errors running PHG MakeInitialPHGDBPipelinePlugin (**UNASSIGNED**)
9 weeks ago by b.contreras.moreira ▴ 200
0
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1
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743
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Comment: Comment: Errors running PHG MakeInitialPHGDBPipelinePlugin (**UNASSIGNED**)
9 weeks ago by b.contreras.moreira ▴ 200
3
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10
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743
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Errors running PHG MakeInitialPHGDBPipelinePlugin (**UNASSIGNED**)
pangenome plants PHG
updated 9 weeks ago by ▴ 420 • written 9 weeks ago by ▴ 200
0
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1
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743
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Comment: Comment: Errors running PHG MakeInitialPHGDBPipelinePlugin (**UNASSIGNED**)
9 weeks ago by b.contreras.moreira ▴ 200
0
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0
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1.2k
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Answer: Answer: Pan genome of genes
9 weeks ago by b.contreras.moreira ▴ 200
0
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0
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464
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Answer: Answer: Get_Homologues
7 weeks ago by b.contreras.moreira ▴ 200
2
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1
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359
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how to add non-reference genes to BED file of intervals for PHG
pangenome plants PHG
updated 10 weeks ago by ▴ 420 • written 10 weeks ago by ▴ 200
1
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0
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3.8k
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Answer: Answer: define PFAM dir in get_homologues perl script
updated 2.3 years ago by 43k • written 9.5 years ago by ▴ 200
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