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Answer: Answer: mitochondrial genome assembly pipeline
3 days ago by shelkmike ★ 1.2k
2
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732
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Answer: Answer: How to compare the quality of assemblies
4 weeks ago by shelkmike ★ 1.2k
1
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1
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842
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Answer: Answer: Porechop output?
11 weeks ago by shelkmike ★ 1.2k
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303
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Answer: Answer: About getorf result
11 weeks ago by shelkmike ★ 1.2k
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0
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587
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Answer: Answer: make a heat map with python
3 months ago by shelkmike ★ 1.2k
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1
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447
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Answer: Answer: Why statistic test should I use?
3 months ago by shelkmike ★ 1.2k
1
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287
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Answer: Answer: What could be a better K-mer for my WGS assembly task using ABySS, with my curre
3 months ago by shelkmike ★ 1.2k
2
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1
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1.3k
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Answer: Answer: How can I identify single-copy genes in a specific genome?
3 months ago by shelkmike ★ 1.2k
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0
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255
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Answer: Answer: Genome Analysis Insights: BUSCO Evaluation of Repetitive Elements and Ploidy Lev
3 months ago by shelkmike ★ 1.2k
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347
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Comment: Comment: Illumina reads to be processed and prepared for reference genome alignment
3 months ago by shelkmike ★ 1.2k
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2.6k
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Answer: Answer: BLAST dot matrix output from command line
5 months ago by shelkmike ★ 1.2k
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14k
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Answer: Answer: Make A Dotplot From Blast Alignment
5 months ago by shelkmike ★ 1.2k
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2
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418
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Tool: Dot_plot_like_in_BLAST, a standalone tool for making dot plots similar to what online BLAST makes
Megablast Blastn dot plot dotplot BLAST
updated 5 months ago by 43k • written 5 months ago by ★ 1.2k
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474
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Answer: Answer: Obtain satellite DNA monomer from dot plot
5 months ago by shelkmike ★ 1.2k
1
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366
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Comment: Comment: RepeatModeler-2.0 BuildDatabase error
6 months ago by shelkmike ★ 1.2k
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1
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537
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Comment: Comment: Abyss results
6 months ago by shelkmike ★ 1.2k
2
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1
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537
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Answer: Answer: Abyss results
6 months ago by shelkmike ★ 1.2k
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518
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Answer: Answer: improving genome sequence read depth and confidence by combining sequences from
6 months ago by shelkmike ★ 1.2k
1
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1
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422
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Answer: Answer: Strange BUSCO selected sequences
6 months ago by shelkmike ★ 1.2k
1
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1
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440
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Answer: Answer: Bacterial RNA-seq GC%
7 months ago by shelkmike ★ 1.2k
2
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0
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409
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Answer: Answer: Using sequence percent similarity from alignments to compare duplication events
7 months ago by shelkmike ★ 1.2k
2
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1
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765
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Comment: Comment: Query regarding genome coverage in de-novo assembly
7 months ago by shelkmike ★ 1.2k
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1
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582
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Answer: Answer: Hifiasm coverage rd:i:0
7 months ago by shelkmike ★ 1.2k
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1
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765
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Answer: Answer: Query regarding genome coverage in de-novo assembly
7 months ago by shelkmike ★ 1.2k
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1
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1.1k
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Comment: Comment: Alignment of mirna on specific organism data from mirbase
7 months ago by shelkmike ★ 1.2k
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1
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1.1k
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Answer: Answer: Alignment of mirna on specific organism data from mirbase
7 months ago by shelkmike ★ 1.2k
0
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1
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775
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Comment: Comment: Assessing Rockhopper's output
7 months ago by shelkmike ★ 1.2k
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1
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775
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Answer: Answer: Assessing Rockhopper's output
7 months ago by shelkmike ★ 1.2k
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0
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953
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Answer: Answer: Recommendations for extending contigs from denovo assembly to identify SV insert
7 months ago by shelkmike ★ 1.2k
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1
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469
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Answer: Answer: ptt and rnt files that were created from assembly rather than a genome
7 months ago by shelkmike ★ 1.2k
1
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0
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513
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Answer: Answer: bedGraph for Coverage of Insert from Paired-End Data?
7 months ago by shelkmike ★ 1.2k
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0
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900
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Answer: Answer: How/why contigs and scaffolds end up being identical in number and length by spa
9 months ago by shelkmike ★ 1.2k
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0
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918
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Answer: Answer: Mitochondrial contig identification in fungal genome assemblies
9 months ago by shelkmike ★ 1.2k
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0
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616
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Answer: Answer: Organelle genome assembly did not circularize and I am not sure why
9 months ago by shelkmike ★ 1.2k
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1
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737
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Answer: Answer: codeml analysis for multiple alignments
9 months ago by shelkmike ★ 1.2k
0
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0
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705
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Answer: Answer: Extract FASTA sequences from the nr.gz database
9 months ago by shelkmike ★ 1.2k
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0
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730
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Answer: Answer: What are the offline tools available for the Eukaryotic genome annotation (inclu
10 months ago by shelkmike ★ 1.2k
0
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0
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613
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Answer: Answer: Using tRNAscan-SE for mitochondria tRNA from microeukaryotes like protists and y
11 months ago by shelkmike ★ 1.2k
1
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0
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895
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Answer: Answer: Visualize mitochondrial genome
11 months ago by shelkmike ★ 1.2k
2
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1
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805
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Answer: Answer: How does ncbi-blastP calculate the score ? (Why it is lower than mean-diagonal
11 months ago by shelkmike ★ 1.2k
0
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0
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897
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Answer: Answer: ABySS genome assembler
11 months ago by shelkmike ★ 1.2k
0
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1
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711
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Answer: Answer: how to perform phylogeny to know the evolution of strains
12 months ago by shelkmike ★ 1.2k
0
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0
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568
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Comment: Comment: How to analyze GO term
12 months ago by shelkmike ★ 1.2k
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0
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602
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Comment: Comment: How to remove the contaminant reads from plants sequencing
13 months ago by shelkmike ★ 1.2k
1
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1
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970
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Comment: Comment: Seqtk
13 months ago by shelkmike ★ 1.2k
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1
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515
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Comment: Comment: OrthoFinder problem
14 months ago by shelkmike ★ 1.2k
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0
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1.5k
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Answer: Answer: Bad quality fastq files for analysis
14 months ago by shelkmike ★ 1.2k
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0
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36k
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Comment: Comment: How Do I Convert Fa Files To Bed Format?
14 months ago by shelkmike ★ 1.2k
0
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0
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493
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Answer: Answer: How do I compare evolutionary estimates between two sequence groups in codeML?
14 months ago by shelkmike ★ 1.2k
1
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0
replies
758
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Comment: Comment: database for better classification of illumina contigs
15 months ago by shelkmike ★ 1.2k
179 results • Page 1 of 4
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