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satshil.r
satshil.r
Reputation:
50
Joined:
12.1 years ago
Last seen:
3.3 years ago
Location:
United States
Latest posts by user
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Answer: A: Problems with BLAST db, maybe install issue?
updated by Ram Ram • written by satshil.r • satshil.r
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2 replies
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Answer: A: Deconseq to remove human sequences
updated by Ram Ram • written by satshil.r • satshil.r
2 votes
2 replies
4.0K views
How stringent/loose should clustering be (CD-HIT-EST/USearch) for multi-kmer assemblies?
trinity rna-seq sequencing velvet cd-hit
updated by Ram Ram • written by satshil.r • satshil.r
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Comment: C: How to merge similar transcripts together?
written by satshil.r • satshil.r
1 vote
3 replies
3.2K views
How to merge similar transcripts together?
cd-hit fasta assembly rna-seq
updated by Brian Bushnell Brian Bushnell • written by satshil.r • satshil.r
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1 reply
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Answer: Answer: STAR crashing due to "FATAL ERROR: Read1 and Read2 are not consistent"
updated by Ram Ram • written by satshil.r • satshil.r
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0 replies
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Comment: Comment: STAR crashing due to "FATAL ERROR: Read1 and Read2 are not consistent"
updated by Ram Ram • written by satshil.r • satshil.r
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Comment: C: STAR crashing due to "FATAL ERROR: Read1 and Read2 are not consistent"
updated by Ram Ram • written by satshil.r • satshil.r
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6 replies
7.5K views
STAR crashing due to "FATAL ERROR: Read1 and Read2 are not consistent"
dge fastq star
updated by Ram Ram • written by satshil.r • satshil.r
0 votes
1 reply
2.5K views
How to properly map 4 lanes for differential expression using BWA?
de rna-seq bwa differential expression ht-seq
updated by Devon Ryan Devon Ryan • written by satshil.r • satshil.r
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Comment: C: BWA mem on multiple samples
updated by Ram Ram • written by satshil.r • satshil.r
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1 reply
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Comment: C: Process 50k+ sequences with Blastx for Blast2Go
written by satshil.r • satshil.r
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0 replies
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Comment: Comment: Process 50k+ sequences with Blastx for Blast2Go
updated by Ram Ram • written by satshil.r • satshil.r
2 votes
5 replies
4.8K views
Process 50k+ sequences with Blastx for Blast2Go
blastall blast2go blastx
updated by Ram Ram • written by satshil.r • satshil.r
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