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Comment: Comment: read length in structural variant calling
16 days ago by eebloom ▴ 80
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515
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Comment: Comment: Downsampling long-read BAM files
16 days ago by eebloom ▴ 80
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1
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418
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Comment: Comment: Do I need to go back and filter my long-reads?
16 days ago by eebloom ▴ 80
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1
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418
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Comment: Comment: Do I need to go back and filter my long-reads?
16 days ago by eebloom ▴ 80
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7
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515
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Downsampling long-read BAM files
nanopore BAM QC ONT downsampling
16 days ago by eebloom ▴ 80
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1
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515
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Answer: Answer: Downsampling long-read BAM files
17 days ago by eebloom ▴ 80
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559
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Comment: Comment: Downsampling fastq file
27 days ago by eebloom ▴ 80
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6
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418
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Do I need to go back and filter my long-reads?
alignment nanopore filtering QC ONT
updated 16 days ago by 142k • written 4 weeks ago by ▴ 80
1
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0
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178
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phasing tumor long-reads
nanopore ONT haplotag phasing tumor
10 days ago by eebloom ▴ 80
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1
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515
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Comment: Comment: Downsampling long-read BAM files
5 weeks ago by eebloom ▴ 80
1
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2
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304
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read length in structural variant calling
nanopore SV QC ONT variant
16 days ago by eebloom ▴ 80
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0
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313
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Comment: Comment: comparing VCF files
7 weeks ago by eebloom ▴ 80
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2
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313
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comparing VCF files
long-reads VCF variants ONT nanopore
7 weeks ago by eebloom ▴ 80
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0
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727
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Comment: Comment: somatic variant calling without matched normal in long-reads
7 weeks ago by eebloom ▴ 80
3
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5
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727
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somatic variant calling without matched normal in long-reads
variants cancer illumina ONT nanopore
7 weeks ago by eebloom ▴ 80
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0
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727
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Comment: Comment: somatic variant calling without matched normal in long-reads
3 months ago by eebloom ▴ 80
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0
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645
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Comment: Comment: Filtering long read data
4 months ago by eebloom ▴ 80
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2.5k
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Comment: Comment: Basecalling with dorado
4 months ago by eebloom ▴ 80
2
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3
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645
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Filtering long read data
dorado alignment filtering QC nanopore
4 months ago by eebloom ▴ 80
1
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4
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1.1k
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Filtering qscore on dorado
dorado filtering QC nanopore Guppy
17 days ago by eebloom ▴ 80
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0
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1.1k
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Answer: Answer: Filtering qscore on dorado
17 days ago by eebloom ▴ 80
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1
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1.1k
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Comment: Comment: Filtering qscore on dorado
6 months ago by eebloom ▴ 80
2
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6
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2.5k
views
Basecalling with dorado
variants dorado alignment methylation nanopore
4 months ago by eebloom ▴ 80
1
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0
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2.5k
views
Comment: Comment: Basecalling with dorado
updated 6 months ago by 6.4k • written 6 months ago by ▴ 80
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1
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2.5k
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Comment: Comment: Basecalling with dorado
7 months ago by eebloom ▴ 80
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1
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2.5k
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Comment: Comment: Basecalling with dorado
7 months ago by eebloom ▴ 80
1
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0
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2.2k
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Answer: Answer: Minfi probe filtering
7 months ago by eebloom ▴ 80
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0
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954
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Comment: Comment: filtering sniffles variants for precise calls
11 months ago by eebloom ▴ 80
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2
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954
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filtering sniffles variants for precise calls
sniffles vcf variation
11 months ago by eebloom ▴ 80
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2
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697
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Comparing variant calls
bedtools VCF bcftools
updated 11 months ago by 43k • written 13 months ago by ▴ 80
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0
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360
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multiple testing in 450K array data
minfi methylation 450K epigenetics statistics
13 months ago by eebloom ▴ 80
2
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1
reply
546
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Controlling for FDR in 450k methylation microarray data
minfi methylation 450k limma epigenetics
updated 14 months ago by 3.9k • written 14 months ago by ▴ 80
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0
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522
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Bumphunter function in minfi
minfi methylation DMR bumphunter R
updated 14 months ago by 88k • written 14 months ago by ▴ 80
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0
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387
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updating annotation of illumina human methylation 450k data
minfi methylation 450k annotation infinium
15 months ago by eebloom ▴ 80
0
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1
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993
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Comment: Comment: Dealing with missing (NA) values in my 450K methylation array dataset
15 months ago by eebloom ▴ 80
1
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3
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993
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Dealing with missing (NA) values in my 450K methylation array dataset
minfi PCA expression Methylation R
updated 15 months ago by ★ 2.0k • written 15 months ago by ▴ 80
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1
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801
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Comment: Comment: Downloading 450k methylation data from GEO
15 months ago by eebloom ▴ 80
0
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3
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801
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Downloading 450k methylation data from GEO
minfi 450K IDAT Methylation GEO
updated 15 months ago by 142k • written 15 months ago by ▴ 80
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