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Answer: Answer: Seeking Guidance on Identifying Mutations in DARs from ATAC Data in Cancer Genom
13 days ago by LChart 3.9k
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294
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Answer: Answer: Where to get the following bed file?
13 days ago by LChart 3.9k
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1
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660
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Answer: Answer: Post-imputation plot
18 days ago by LChart 3.9k
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1
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660
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Answer: Answer: Post-imputation plot
20 days ago by LChart 3.9k
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325
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Answer: Answer: Inconsistency in SNP detection pipelines for multi-sample analysis
4 weeks ago by LChart 3.9k
2
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1
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739
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Answer: Answer: DEG analysis of RNA-seq data across multiple tissues and two conditions
4 weeks ago by LChart 3.9k
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287
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Answer: Answer: Getting marker genes for cell types
4 weeks ago by LChart 3.9k
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270
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Answer: Answer: Using adonis to include a random effect
4 weeks ago by LChart 3.9k
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531
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Answer: Answer: how to get the variance explained by the independent variable from multivariate
4 weeks ago by LChart 3.9k
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531
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Answer: Answer: how to get the variance explained by the independent variable from multivariate
5 weeks ago by LChart 3.9k
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1
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373
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Answer: Answer: Why is DESeq2 normalization making my top feature have identical values across s
5 weeks ago by LChart 3.9k
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342
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Answer: Answer: I am unsure why my files are not being accepted in bedtools jaccard, any tips?
6 weeks ago by LChart 3.9k
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1
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520
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Answer: Answer: Selection criteria for nanobody
6 weeks ago by LChart 3.9k
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400
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Answer: Answer: cell type adjustment - how many cell types to include?
7 weeks ago by LChart 3.9k
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1
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316
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Answer: Answer: two channel detection in SNP-chip
8 weeks ago by LChart 3.9k
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1
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374
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Answer: Answer: Beagle Phasing and Imputation
8 weeks ago by LChart 3.9k
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217
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Answer: Answer: basal gene expression level
8 weeks ago by LChart 3.9k
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624
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Answer: Answer: How to corrected test statistics based on the LDSC intercept?
9 weeks ago by LChart 3.9k
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267
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Answer: Answer: Fold change vs signal p-value in ENCODE ATAC-seq
9 weeks ago by LChart 3.9k
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507
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Answer: Answer: VCF file not being indexed, decided to sort could not sort
9 weeks ago by LChart 3.9k
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2
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513
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Answer: Answer: java version compatible with GATK 3.2.2
9 weeks ago by LChart 3.9k
2
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1
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338
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Answer: Answer: Calculation variant frequencies for copy number events for a cohort
10 weeks ago by LChart 3.9k
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0
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253
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Answer: Answer: convert and merge somatic vcf file to plink format
10 weeks ago by LChart 3.9k
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1
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519
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Answer: Answer: What are the best HW p-value & MAF cutoffs based on my study ?
10 weeks ago by LChart 3.9k
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1
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925
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Answer: Answer: Help with the new nomenclature of multi-nucleotide variants
10 weeks ago by LChart 3.9k
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0
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317
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Answer: Answer: DESeq and SVA for batch effect
10 weeks ago by LChart 3.9k
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292
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Answer: Answer: How is it possible to differentiate CG or AT heterozygous in Illumina Infinium G
10 weeks ago by LChart 3.9k
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368
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Answer: Answer: no permission to install to directory
10 weeks ago by LChart 3.9k
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1
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401
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Answer: Answer: Estimate cell label fitness in a clustering
10 weeks ago by LChart 3.9k
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1
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817
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Answer: Answer: You have 3 days of zero obligations and expansive resources. What are you buildi
10 weeks ago by LChart 3.9k
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1
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341
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Answer: Answer: WGCNA, correlation with trait data from different individuals
11 weeks ago by LChart 3.9k
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1
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402
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Answer: Answer: perplexed regarding the process of gene expression normalision
12 weeks ago by LChart 3.9k
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0
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454
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Answer: Answer: Question about the AMRFinderPlus and CARD tools
12 weeks ago by LChart 3.9k
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0
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2.4k
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Answer: Answer: how to install conda bcftools +fill-tags plugin ?
12 weeks ago by LChart 3.9k
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1
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589
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Answer: Answer: How to find genomic locations of SNP probes in EPIC chips
3 months ago by LChart 3.9k
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2
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663
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Answer: Answer: both log2 and log2fc giving a completely huge difference of a gene in subpopulat
4 months ago by LChart 3.9k
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0
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315
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Answer: Answer: eQTL analysis using GWAS summary statistics only
4 months ago by LChart 3.9k
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1
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529
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Answer: Answer: Tracks of single cell data in a heatmap form
4 months ago by LChart 3.9k
2
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1
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866
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Answer: Answer: Can LASSO be applied after converting and merging different RNAseq datasets into
4 months ago by LChart 3.9k
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0
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330
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Answer: Answer: Account for know genetic variance in transgenic animal models during RNA-seq ana
6 months ago by LChart 3.9k
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1
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907
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Answer: Answer: Calculating p-value and adjusted p-value for pre-normalized microarray data with
6 months ago by LChart 3.9k
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1
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737
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Answer: Answer: how to convert beta effect size of SNP to a statistical value to be compared acr
6 months ago by LChart 3.9k
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1
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3.4k
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Answer: Answer: Merging multiple samples in Seurat
7 months ago by LChart 3.9k
4
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2
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2.5k
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Answer: Answer: Using bcftools to find unique alt homozygous sites
7 months ago by LChart 3.9k
2
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1
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674
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Answer: Answer: Why my GWAS p-value QQ-plot is far above diagonal
7 months ago by LChart 3.9k
0
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0
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494
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Answer: Answer: I need help with univariate logistic regression in a set of microarray data
7 months ago by LChart 3.9k
0
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1
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504
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Answer: Answer: Generating a 3D model from 2D slices of a nucleus
7 months ago by LChart 3.9k
2
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1
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705
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Answer: Answer: Subclustering of intergated cells from scRNA-seq data
updated 7 months ago by 43k • written 7 months ago by 3.9k
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0
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595
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Answer: Answer: Lower alignment rate when using collapsed reads
7 months ago by LChart 3.9k
3
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0
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559
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Answer: Answer: Unable to build applet in DNAnexus, .jar file not found
7 months ago by LChart 3.9k
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