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Timotheus
Timotheus
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Joined:
4.3 years ago
Last seen:
2.4 years ago
Location:
United Kingdom

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Latest posts by user
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Comment: Comment: Why does low-coverage library give more contiguous assembly than high-coverage l
written by Timotheus • Timotheus
1 vote
3 replies
1.8K views
Why does low-coverage library give more contiguous assembly than high-coverage library?
illumina spades assembly n50
updated by Jesse • Jesse • written by Timotheus • Timotheus
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Comment: Comment: Why do my 'high-quality' variants look like artifacts?
written by Timotheus • Timotheus
0 votes
2 replies
1.3K views
Why do my 'high-quality' variants look like artifacts?
snps vcf alignment variants
written by Timotheus • Timotheus
1 vote
1 reply
1.3K views
Subsetting a VCF by a logical vector
vcf vcfr r
updated by zx8754 zx8754 • written by Timotheus • Timotheus
0 votes
2 replies
1.9K views
Geneious can't find all the sequences it needs in the selected file.
bam sam geneious
updated by M.O.L.S • M.O.L.S • written by Timotheus • Timotheus
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Comment: Comment: Bcftools: filtering by AD as a percentage of DP
written by Timotheus • Timotheus
0 votes
1 reply
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Comment: Comment: Bcftools: filtering by AD as a percentage of DP
written by Timotheus • Timotheus
0 votes
3 replies
1.8K views
Bcftools: filtering by AD as a percentage of DP
bcftools
written by Timotheus • Timotheus
1 vote
0 replies
0 views
Comment: Comment: Counting softmasked bases in a FASTA
written by Timotheus • Timotheus
0 votes
4 replies
1.9K views
Counting softmasked bases in a FASTA
fasta
written by Timotheus • Timotheus
0 votes
0 replies
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Comment: Comment: BCFtools: filtering variants by position
written by Timotheus • Timotheus
0 votes
2 replies
1.9K views
BCFtools: filtering variants by position
bcftools snps
written by Timotheus • Timotheus
0 votes
0 replies
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Comment: Comment: SNP numbers don't add up to the number of record in a vcf
written by Timotheus • Timotheus
0 votes
2 replies
952 views
SNP numbers don't add up to the number of record in a vcf
bcftools gatk
written by Timotheus • Timotheus
0 votes
1 reply
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Comment: Comment: Centrally installed Braker2 error: AUGUSTUS_CONFIG_PATH/species is not writeable
written by Timotheus • Timotheus
0 votes
3 replies
4.3K views
Centrally installed Braker2 error: AUGUSTUS_CONFIG_PATH/species is not writeable.
braker2 augustus
updated by Michael Dondrup Michael Dondrup • written by Timotheus • Timotheus
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Comment: Comment: Filtering multiple-samples VCF by genotype with GATK
written by Timotheus • Timotheus
0 votes
2 replies
1.2K views
Filtering multiple-samples VCF by genotype with GATK
gatk snps
written by Timotheus • Timotheus
0 votes
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Comment: Comment: Reading in input file into a Snakemake pipeline
written by Timotheus • Timotheus
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