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iamsmor
iamsmor
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Joined:
4.7 years ago
Last seen:
3 weeks ago
Location:
Turkey

PhD candidate in Bioinformatics

Latest posts by user
0 votes
1 reply
633 views
Custom background gene set for enrichment in variant-based analysis?
clusterprofiler enrichment pathway analysis
updated by dthorbur dthorbur • written by iamsmor • iamsmor
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0 replies
0 views
Comment: Comment: Read group addition order in RNA-seq short variant discovery (SNPs + Indels)
written by iamsmor • iamsmor
0 votes
1 reply
0 views
Comment: Comment: Read group addition order in RNA-seq short variant discovery (SNPs + Indels)
written by iamsmor • iamsmor
0 votes
1 reply
0 views
Comment: Comment: Read group addition order in RNA-seq short variant discovery (SNPs + Indels)
written by iamsmor • iamsmor
0 votes
6 replies
1.6K views
Read group addition order in RNA-seq short variant discovery (SNPs + Indels)
rnaseq variantcalling addreadgroups gatk
updated by GenoMax GenoMax • written by iamsmor • iamsmor
0 votes
0 replies
0 views
Answer: Answer: Where to find known sites for mm39 used by GATK4 BaseRecalibrator?
written by iamsmor • iamsmor
0 votes
1 reply
1.2K views
Does the order of SplitNCigarReads and MarkDuplicates affect RNA-seq variant calling results?
variantcalling. rnaseq gatk
updated by rfran010 • rfran010 • written by iamsmor • iamsmor
0 votes
1 reply
1.9K views
GATK BQSR error — Reference and BAM file chromosome name mismatch (“chr” vs. no “chr”)
gatk vcf bsqr
updated by Ram Ram • written by iamsmor • iamsmor
0 votes
0 replies
0 views
Comment: Comment: ı cant install clusterprofiler on my Ubuntu 20.04.6 LTS
written by iamsmor • iamsmor
0 votes
2 replies
1.6K views
ı cant install clusterprofiler on my Ubuntu 20.04.6 LTS
bioconductor rpackage clusterprofiler
written by iamsmor • iamsmor
0 votes
1 reply
989 views
Pathway analysis for mouse gene sets
mouse gage pathway-analysis gene-enrichment
updated by Ming Tommy Tang Ming Tommy Tang • written by iamsmor • iamsmor
0 votes
0 replies
555 views
AlphaFold3 molecular docking
alphafold3 ligand moleculardocking
written by iamsmor • iamsmor
0 votes
1 reply
1.2K views
Automated my docking results by using script
receptor-ligand-interaction dsv vina
updated by Ram Ram • written by iamsmor • iamsmor
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0 replies
0 views
Comment: Comment: Downloaded pdb's on rcsb.org
written by iamsmor • iamsmor
0 votes
1 reply
0 views
Comment: Comment: Downloaded pdb's on rcsb.org
written by iamsmor • iamsmor
0 votes
2 replies
0 views
Comment: Comment: Downloaded pdb's on rcsb.org
updated by Ram Ram • written by iamsmor • iamsmor
0 votes
12 replies
4.4K views
Downloaded pdb's on rcsb.org
rcsb pdb
updated by Ram Ram • written by iamsmor • iamsmor
0 votes
0 replies
0 views
Comment: Comment: autodockvina
written by iamsmor • iamsmor
0 votes
2 replies
1.9K views
autodockvina
python python3 autodock
updated by Ram Ram • written by iamsmor • iamsmor
0 votes
1 reply
0 views
Comment: Comment: autodock vina on mac
updated by Ram Ram • written by iamsmor • iamsmor
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