CGI somaticVCF file

Question

[kanwarjag]

I want to work with somatic vcf file from Complete genomics what should be teh best way. I tried to use regular tools which will read VCF file but it throws in error. I was wondering if someone has used such VCF file and can share their experience.

Thanks

[donfreed]

What tool are you using and what is the error message?