I am looking for a program that will allow me to make representative schematics or diagrams of a protein protein interface. I need to compare tens to hundreds of interfaces at a glance, and especially need a way to show my findings to other readers in a quick and accessible way.
My supervisor likes the following :
unfortunately he can no longer remember what program he used to make it. So if anyone can tell me what it is or a similar programme I will be very grateful.
Otherwise I am already familiar with Dimplot but don't think it works too well.
Thanks for you time and help
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cause.cause •
The software your supervisor used before is PRICE
I found it by googling "core residues" "rim residues" DDG
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Dan D
Nice detective work! That link didn't work for me, so I pointed it to the pubmed page
Thanks a lot, Does anyone know if the server no longer exists or if it's a permission problem that it won't open?
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I don't know which program that is, but if you need to visualize networks/interactions, Cytoscape is often the answer.
Hi thank you, I think it will be useful down the line to show the scores and relationships. Still I need a way to visualize the actual protein-protein interface.