Association Analysis Snp Which Package To Use
Dear all.
I have genotyped different SNP arrays with the package crlmm. Once I get the large matrix object (snpmatrix) or snpset with genotyped information, which package should I use to get an association analysis?To know which snps are more present in the disease samples.
I've seen some packages but they need a different input (plink,bam..), that I don't have.
Thank you
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