Exploring Wbsa What Is A-Rich And T-Rich File?
I am working on bisulfite seq. and trying to use WBSA (http://wbsa.big.ac.cn/index.jsp) However their input files are A-rich file and T-rich files. I am not clear how I will get two types of FASTq files (A / T rich) I emailed authors but no reply as yet. Any pointer will be helpful
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Downloading paired end fastq data from SRA
written by Matheus •
-
mitichondrial marker genes in SCRNAseq
written by rob.costa1234
-
Qc of Bisulfite Fastq file
written by rob.costa1234
-
PAMR Error in 1:ncol(data$x) : argument of length 0
written by Sheila
-
Where Can I Find Additional Gene Sets To Extend Msigdb For Gsea?
written by enricoferrero
-
Exome Sequence Work Flow
written by Raju •
-
Picard Library: H And B Types
written by ranlib •
-
Vcf Programming Language Api'S / Parsers Available?
written by William
-
Is Plink Dead ?
written by Radhouane Aniba
-
Bisulfite Analysis With Illumina Fastq From Different Lanes
written by Tonig
I don't think I'd rely on a web service for bisulfite sequencing data. There are a lot of aligners out there for this that you can just run locally. Bismark is the most popular, but there are many others, including bwa-meth (written by brentp on this site) and bison (written by me). Presuming you're new to this and don't have many samples, you'll probably find bwa-meth to be a good fit.