Annotations Tools
Dear all Which tools are suitable for annotation after align using Minimap2 and call variant using Svim for long-read Pacbio Revio CCs sequencing files for crops?
• 795 views
•
link
written
by
abebe1423 •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Very high number of unique sequences in PacBio full-length 16S CCS data using DADA2
written by muhammad.ali •
-
How to Generate PacBio HiFi Reads with Ground Truth Using PBSIM3?
written by DBPZ •
-
Removing duplicates
written by quentinperriere •
-
Processing and calling SVs from PacBio data
written by adarsh •
-
PacBio subreads.fastq files?
written by majeedaasim •
-
PacBio Pipeline and Tools for Variant Call
written by Kiran
-
Pacbio de-novo assembly
written by Ap1438 •
-
collapsing pacbio reads into a single sequence
written by Sara
-
Splicing in virus using long read sequencing
written by snishtala03 •
-
Nanopore SNP and indels calling tool
written by tarek.mohamed
Please add more details if you want an answer. Data you have, what you want to achieve, etc are all really cryptic.
thank you, dear,
I want to do, first merge the vcf file from 4 callers after that, I want to annotation it using annotation tools
So I want help on how to merge VCF using Panpop and which annotation tools are recommended?