This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Protein annotation, gene annotation, hordeum vulgare RNA-Seq

Hello,

I have list of transcript mapped to Hordeum vulgare genome, e.g.,

HORVU.MOREX.r2.UnG0628590.1 HORVU.MOREX.r2.5HG0361000.1 HORVU.MOREX.r2.UnG0628880.1

I would like to add annotation about protein function and protein name, GO and KEGG Id?

protein vulgare rna-seq hordeum gene

1 answer

UniProt appears to have proteomes for Barley: https://www.uniprot.org/proteomes/UP000011116

That may be your best bet. They also have GO annotations. You will have to map your ID's on to these.

barley

Log in to answer this question.