making a circos for snps indels and SV

Hi,

I have to generate a circos plot with tracks for each type of variants such as SNPs, INDELs, CNV and Structural variations.

I have called SNP and Indel calling through GATK. Structural variation calling through Lumpy.

Pleas guide how can i plot a cricos for Lolium perenne.

Thanks alot!

circos

• 1,015 views • link

updated 1.6 years ago by Bastien Hervé

• written 1.6 years ago by Bushra Bibi

https://jokergoo.github.io/circlize_book/book/initialize-genomic-plot.html

https://r-graph-gallery.com/chord-diagram.html

• 0 views • link

written 1.6 years ago by Bastien Hervé

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