Dear All,
I have been googling to find the completion tutorial for spatial transcriptomic and proteomic in R or Python, but not quite get the right one yet. Do you happen to know the site or book I can access to learn this area. Looking forward to hearing form you soon.
Kind Regards,
Synat
1 answer
To get you started:
https://github.com/crazyhottommy/awesome_spatial_omics
https://satijalab.org/seurat/articles/spatial_vignette
https://satijalab.org/seurat/articles/visiumhd_analysis_vignette
https://bookdown.org/sjcockell/ismb-tutorial-2023/practical-session-1.html
https://scanpy.readthedocs.io/en/stable/tutorials/spatial/basic-analysis.html
Proteomics
https://www.bioconductor.org/packages/devel/bioc/vignettes/msqrob2/inst/doc/cptac.html
Others may have more.
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