CIBERSORTx error (error in rep(2, size * length(cells) -1)) : invalid 'times' argument
Hi, I am Amairani new to using CIBERSORTx for cell type deconvolution. I am trying to create a signature matrix from a single-cell reference matrix. However, I am getting this error:
Error in rep(2, size * (length(cells) - 1)) : invalid 'times' argument Calls: CIBERSORTxFractions -> makeRefandClassFiles Execution halted
I am grateful for any advice, this is an example of what my single cell matrix looks like:
• 768 views
•
link
written
by
Amairani •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Error in deconvolution using CIBERSORTx
written by yadavsoumya647 •
-
cibersortx error - $ operator is invalid for atomic vectors
written by Franck •
-
Help with CIBERSORTx Error in Single-Cell RNA-seq Analysis: Invalid 'times' Argument
written by Pumla •
-
CIBERSORTx error (error in rep(2, size * length(cells) -1)) : invalid 'times' argument
written by Mr. George •
-
cibersort. problem
written by gem1 •
-
Is it possible to run CibersortX with a very small number of samples?
written by Aspire
-
Failed to connect to cibersortx.stanford.edu:80: Connection timed out
written by abbas89 •
-
CIBERSORTx error: 'x' must be an array of at least two dimensions
written by Jie •
-
Issue while running CIBERSORTx on Bulk RNA-Seq data
written by Bioinfo_Dreamer •
-
[SOLVED] How to build a table with gene expression per cell type with Seurat ?
written by Evan •
