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cibersort. problem

Hi, I am building gene expression matrix with cibersortx and I got this error

Error in rep(2, size * (length(cells) - 1)) : invalid 'times' argument
Calls: CIBERSORTxFractions -> makeRefandClassFiles
Execution halted

Does anyone encounter this before? What's the issue would be?. Thank you sooo much in advance.

cibersort gema122

I'm also struggling with the same problem, or error. Did you encounter it when you create signature matrix from scRNA-seq? I'm using expression matrix aggregated by annotated cell types with Seurat. It doesn't work... I also need help for the issue...

Hi, fyfy. I hope you are well. I am having the same problem and also used Seurat. I want to ask you if you resolved it. Thank you so much for your answer.

Hi, Gem1. I hope you are well. I am having the same problem. I want to ask you if you resolved it. Thank you so much for your answer.

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