This is a test version of Biostars. For the public version, visit https://www.biostars.org.
which is the best cnv tool for both germine and somatic

I am currently working some exome samples and i wanted to know which Copy number variation tool would be good for both Somatic and Germline samples

cnv

1 answer

While I am not working on somatic variants, I found GATK's germline CNV tool to be great (refer to the links below).

CNVs Germline

Somatic CNVs

Log in to answer this question.