ReactomeGSA adjustment for confounding variables
How can I adjust for categorical and continuous variables during ReactomeGSA-Camera analysis?
pathway-analysis
reactomegsa
batch-effect
• 507 views
•
link
updated
by
Ram
4.5K
• |
written
by
Shaimaa Gamal
1
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Spatial correlation between two continuous variables
written by hossiny 0Hi, Is there a metric that I can use to measure the spatial correlation between two continuous variables? I am aware of the Moran's I …
-
ReactomeGSA
written by Shaimaa Gamal 1How to extract the genes associated with the enriched pathways from ReactomeGSA results? The excel file contains only the enriched pathways without the associated genes.
-
Statistics help
written by f6f66bd0 0can anyone guide me on how to on how to statistically approach my datasets from a knockout. I’m unsure of what variables I should be …
-
Function crr from cmprsk package with categorical variable
written by Nona 9Dear Community, I would be really happy if you could help me with this: I have built a "Fine & Grey"(crr) - model and I …
-
Tools for screening the influence/importance of covariates in multidimensional data
written by Papyrus 310Hi all, I'm looking for tools which can be used to check the importance of covariates (either continuous or categorical) in explaining information in data …
-
Kruskal-Wallis test for two groups
written by huynguyen96.dnu 5Hi all, I used a clustering tool to partition samples into two groups. Next, I want to see the statistical differences between them in terms …
-
What would cox regression for continuous covariate looks like? How to interpret it?
written by szc002 0Hi, Very new to survival analysis here. I am now trying to correlate the gene expression level with survival and prognosis for patients with lung …
-
how to perform correlation analysis between binary and continuous variables?
written by shalinisonar13 5Can any one tell me how to perform correlation analysis between binary and continuous variables? I have to do this analysis for publication wherein we …
-
How to use an ordinal or discrete phenotype in plink?
written by noahconnally 3I want to run an association using plink. I know that you can use data that is continuous and data that is categorical. However, my …
-
How to adjust data for "continuous" covariates ?
written by housebie 5We know packages like SVA and ComBat, which can be used to adjust data for batch effects or biological artifacts. However, in most cases, all …