How to Convert a tar file to a fastq file in Galaxy
Hello!
I am trying to convert a tar file from GEO to a fastq file to perform Pathway Enrichment Analysis using Galaxy. However, I am not able to do so in Galaxy. Can anyone help in solving this issue?
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Galaxy specific questions are best posted to their help forum: https://help.galaxyproject.org/
That said you probably may need the uncompress tool: https://usegalaxy.org/?tool_id=CONVERTER_gz_to_uncompressed&version=latest
Tar files provide no compression compared to the originals. The intent of tar utility was to group many files into one tape archive, which is subsequently compressed by
gzip,bzipor a similar utility. My advice is to either upload the original files - should be no different in terms of size - or better yet to compress the original files directly withgzip. I assume Galaxy would work with.gzfiles.