vg giraffe, accept admixed single and paired reads as input
Is it possible for vg giraffe to accept admixed single-end and paired-end reads together in a single input stream - similar to minimap2 or bwa smart pairing?
Thanks.
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Jordan M Eizenga •
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Thomas •
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Thomas •
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This is not currently implemented. They would have to be separated and mapped with two
vg giraffeprocesses.