Thank you so much jared.andrews07 it looks like I will be able to get what I intended with these sources !!
TFs and Gene databases
I have started my involvement in a project where I will be working with NGS data for the generation of regulatory networks. For this, I would need to acquire a database with TFs and their targets.
Can someone provide me with some guides on where to look for this kind of database?
• 1,598 views
•
link
updated
by
b.contreras.moreira •
•
written
by
ijarne •
•
written
by
ijarne •
2 answers
I can also suggest https://footprintdb.eead.csic.es which links TFs to their DNA motifs, not their gene targets.
• 0 views
•
link
written
by
b.contreras.moreira •
Log in to answer this question.
More posts like this
-
Different versions of RegulonDB regulatory network - which to use (and how)?
written by v.baca •
-
long non coding RNAs annotation file
written by annaA •
-
Pipeline validating in miRNA studies
written by Yoosef •
-
Finding a way to comparison induced cells and real tissue by Cytoscape!
written by Calangoa •
-
RNA-seq for drug targets
written by chipolino •
-
how to get genes and their interactions from RNA-Seq data?
written by raza.ul.haq.ruh •
-
Forum: Cancer research for computer science student
written by mhasa006
-
How can I Find modules of a gene?
written by hodatn •
-
Use of Viper with a regulatory network built with my dataset or another one?
written by ldetorrente •
-
Which are the most well-known transcription factors in human? (interested in their GO terms)
written by R.Blues
