Entering edit mode
12 days ago
abhishekghadge
•
0
Having an issue trying to use the samtools view gs://mybucket/myfile.bam > myfile.bam when using this command with docker.
Always get the error "samtools view: failed to open "gs://mybucket/myfile.bam" for reading: Protocol not supported"
Although the command works just fine GCP VMs, Im unable to recreate this in a docker container.