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Is it possible to set different tracks to the same scale in JBrowse

Hi I am trying to visualize different RNAseq data as tracks in JBrowse. Although the expression level of the gene is question is quite different, all the tracks adjust the height to their value range, so they look similar (see image). Is there a way of setting them to use the same scale? enter image description here

track jbrowse

1 answer

I dont think there is a built in way to do it easily besides manually setting this via edit config on the track label in json format...

But, one other option is to use the multibigwig plugin https://github.com/elsiklab/multibigwig (disclaimer: I wrote this)

Thanks for the tip. The multibigwig is not exaclty what I thought but it might do the trick. Will try it. Thanks!!

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