In scRNA, How should I set QC standards?
To do QC, I drew a plot as follows.
The paper I found to set the standard said that for humans, percent.mt is used as a standard of 10%.
However, it is even more confusing to see that in some papers that actually analyzed it, they used 25%.
I am curious about how to set the standard in this plot, and whether the standard for each sample should be set differently or the same when filtering.
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