Seeking for edgeR TMM Normalization calcul example

I have found a very useful link that explains how to calculate the DESeq2 median of ratios normalized counts, step by step, using an example:

https://hbctraining.github.io/DGE_workshop_salmon_online/lessons/02_DGE_count_normalization.html

I am trying to find something similar for edgeR TMM normalization. Does anyone know of a similar resource?

tmm edger deseq2

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updated 2.4 years ago by jared.andrews07

• written 2.4 years ago by Picasa

1 answer

StatQuest has good videos with illustrative examples for both edgeR and DESeq2.

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written 2.4 years ago by jared.andrews07

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