Hi everyone,
I have a, maybe rather simple, question on TensorQTL Mapping:
What I want to do:
Run a cis Mapping, getting all cis-associations between variants and genes as an output file, including permutation/beta approximated p values.
What I get:
For each gene just the variant with the top association to this gene is saved in the output file. If I run cis_nominal mode I get all associations printed in the output file, but of course without permutation/beta approximated p values.
My Question:
Does anyone knows, if there is a possibility to get an outout file containing all cis variant-gene associations, not just the top one, with calculated beta-approximated p values?
Thanks a lot in advance!
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