Hello,
I tried Google but didn't find anything satisfying. I am doing some genetics analyses on a large family and would like to confirm e.g. that the numbers of shared SNVs between two or more samples are reasonable.
The only number I found via Google is that a typical human WGS will have anything between 3 and 20 million SNVs, which isn't very precise...
Thanks in advance!
see this response by Paolo Maccallini:
Thanks Jeremy, I am very impressed at how Xwitter posts can be embedded so easily...
Anyway, yes indeed that 4.5M would be the maximum - but what about the average? It should be much lower ja?
We could study this empirically on our 1000 genomes data. PM me and we'll discuss a scoring strategy (defining exactly what shared means)
Interesting! I'd love to discuss, but there's no PM function here, and you don't allow PMs on Xwitter. You can email me at joelwallenius at gmail, for example. :)