Phylogenetic analysis of Nucleic Acid Sequence
Hi
I am a beginner and do not know how to analyze my 16S sanger sequences and amplicon sequences for phylogenetic analysis. I understand I have two different nucleotide sequence types (one for single bacterial colony, and another one from fecal sample). I want to identify my bacterial isolate and assigned them to the correct taxa. For amplicon sequence, I want to characterize bacterial diversity. What suitable bioinformatic tools and workflow will I use?
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Winnifred •
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You can use
Qiime2: https://docs.qiime2.org/2023.9/This is for biostar spam code.