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GAF files in pangenomics

I have been working on NCBI-submitted data, I downloaded the GAF file but am unable to view the file. Can anyone suggest to me which tool should I use to view the GAF file and how to execute it?

go annotation
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updated by colindaven colindaven • written by Pooja • Pooja

Please change the title to something meaningful, thanks

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written by colindaven colindaven

Adding to this, the title field is not to enter your job title - it's like a subject line for the body of your post.

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written by Ram Ram

1 answer

A GAF file is a Graph Alignment Format file. You can read it with a text file viewer like notepad++ or less

See it and other pangenome formats here:

https://github.com/colindaven/awesome-pangenomes

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written by colindaven colindaven

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