Extract Loci based on the snps number
I have ddard NGs data and data now in VCF format. I want to extract Loci, which has than 4 to 9 SNPS/loci for Skyline plotting. Can anyone can help me?
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safiq713 •
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safiq713 •
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I think this may be what you're looking for.
You can subset by regions.
https://samtools.github.io/bcftools/bcftools.html#view