MaxEntScan Alternative splice site prediction
I am using MaxEntScan for 3' splice site prediction in my transcript. On adding my sequence in input I get various 75bp sequences on the output window with each having its particular score. I want to know of that 75bp sequence how much part is supposed to be intronic region and exonic region respectively?
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Tool: SpliceMap - annotate splicing regulatory elements on GenBank files
written by maxwraae •
-
Question about protein-peptide docking
written by Acervo •
-
Intron variant identifier
written by Sabeen •
-
What are the min/max of the MaxEntScan software ?
written by 乙
-
MaxEntScan scores: How interpret them?
written by Adrian •
-
Extracting the sequence of isoforms from RNA-seq data
written by pixie@bioinfo
-
VEP vs webserver Polyphen scores
written by regrant •
-
A question about software MaxEntScan
written by jz6002 •
-
Determine Where Is My Oligo Probe In The Gene? In Exonic Region Or Interonic Region
written by Omid
-
Non Exonic Snp (Intronic ,Utr 3 , Utr 5 ,Intergenic) Effect Prediction
written by Abdel •
