Hello, For CNV detection from targeted NGS data, I was running CNVPanelizer tutorial, I get an amplification as a non-reliable change in a gene of …

Hi, I am want to find copy number variations in my exome sequencing data. For this purpose i would like to use `contra`. I do …

I'm using CNVkit to detect copy number changes in my samples which have been obtained from amplicon sequencing (sequenced region is around 330kb). I have …

i want to identify CNV using WGS data. i mapped my reads into reference genome and now using Biomedical genomics workbench, i wanna detect CNV …

I have received mi-seq data for targeted genomic region of human. I need to find the amplified region. How could I find from my .bam …

Hi, I'm new to CNV calling and the cnvkit software. I was wondering whether 1) there is a way to access the confidence of a …

Hi. I am currently doing targeted sequencing. We targeted 400genes with depth of 500. I just entered the field of bioinformatics and this is my …

Hi friends, Recently, we performed exome sequencing for 3 samples using Nextera sequencing machine. We used new kit for exome sequencing. So I am interested …

I am looking at a region that has a copy number increase in my samples I have sequenced compared to the reference. Based on read …

I am working on whole genome and exome genotyping data and also need to do some analysis with the targeted genotyping data. Is there any …