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Running GCTA/GSMR and getting an error for .fam file

Hi,

I am trying to run GCTA GSMR analysis. I have the bed/bim/fam files for Chromosome 1-22. I created a text file with path to these PLINK files. It tells me that the analysis has started but then cannot read the .fam file When I tried to read just the .fam file, it reads very well. But during the analysis this is the error that I get " gsmr_ref_data_chr11.fam not found"

Can anyone help?

plink gsmr gcta .fam

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